C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetraspanin 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115250 Tspan33-002 ENSMUSG00000001763 10090 + 6:29694234-29718557 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115250
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115250 0.626±0.07 0.531±0.46 0.473±0.19 2.777±2.69 1.754±0.58 3.996±0.62 0.509±0.36 5.768±1.07 14.663±15.28 0.330±0.10 0.470±0.14 1.835±0.89 4.881±1.64 1.488±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YG CIL_0001YG_0002 CGP 6:29540827-29718559
CIL_00024K CIL_00024K_0003 CGP 6:29694222-29761365

Gene Ontology

GO IDEvidence TypeGO Description
GO:0009986 IDA cell surface
GO:0016021 IEA integral component of membrane
GO:0019899 IPI enzyme binding
GO:0051604 IMP protein maturation
GO:0090002 IMP establishment of protein localization to plasma membrane
GO:0097197 IDA tetraspanin-enriched microdomain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000486685 TSPAN33-001 protein_coding Homo_sapiens 0 1275
ENST00000496963 TSPAN33-003 retained_intron Homo_sapiens 0 327
ENST00000614309 TSPAN33-002 retained_intron Homo_sapiens 0 649

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