C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB3D, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115351 Rab3d-001 ENSMUSG00000019066 10090 - 9:21907491-21918192 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115351
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115351 30.455±11.89 31.676±2.43 19.027±0.51 3.532±2.33 24.049±1.20 58.170±2.28 4.067±0.49 5.335±0.39 4.626±2.46 21.905±0.44 0.954±0.11 12.556±3.54 2.795±2.32 3.785±1.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016R CIL_00016R_0003 CGP 9:21907491-21927535

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005739 IDA mitochondrion
GO:0005886 IEA plasma membrane
GO:0006887 IEA exocytosis
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0017157 IDA regulation of exocytosis
GO:0018125 IDA peptidyl-cysteine methylation
GO:0042588 IDA zymogen granule

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000222120 RAB3D-001 protein_coding Homo_sapiens 0 765
ENST00000589655 RAB3D-002 protein_coding Homo_sapiens 0 765

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