C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: staufen (RNA binding protein) homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115360 Stau2-007 ENSMUSG00000025920 10090 - 1:16344198-16375395 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungOvaryPlacentaTestisENSMUST00000115360
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Ovary Placenta Testis
ENSMUST00000115360 1.504±0.00 1.119±0.00 2.291±0.17 25.682±4.40 1.781±0.57 1.675±0.93 0.956±0.47 1.900±0.12 15.408±8.39 0.912±0.00 0.862±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001D6 CIL_0001D6_0002 CGP 1:16105774-16520112
CIL_0001NO CIL_0001NO_0002 CGP 1:16228674-16619489

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355780 STAU2-009 protein_coding Homo_sapiens 0 968
ENST00000453704 RP13-140E4.1-001 processed_pseudogene Homo_sapiens 0 691
ENST00000517542 STAU2-007 protein_coding Homo_sapiens 0 968
ENST00000518502 STAU2-015 protein_coding Homo_sapiens 0 532
ENST00000518767 STAU2-005 protein_coding Homo_sapiens 0 745
ENST00000518981 STAU2-003 nonsense_mediated_decay Homo_sapiens 0 525
ENST00000519961 STAU2-012 protein_coding Homo_sapiens 0 968
ENST00000521210 STAU2-011 protein_coding Homo_sapiens 0 837
ENST00000521451 STAU2-006 protein_coding Homo_sapiens 0 968
ENST00000521727 STAU2-004 protein_coding Homo_sapiens 0 968
ENST00000522509 STAU2-002 protein_coding Homo_sapiens 0 968
ENST00000522695 STAU2-014 protein_coding Homo_sapiens 0 835
ENST00000523533 STAU2-029 protein_coding Homo_sapiens 0 547
ENST00000523558 STAU2-010 protein_coding Homo_sapiens 0 835
ENST00000524300 STAU2-001 protein_coding Homo_sapiens 0 835

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