C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: staufen double-stranded RNA binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000522695 STAU2-014 ENSG00000040341 9606 - 8:73420369-73738327 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyMuscleOvaryPlacentaENST00000522695
Transcript ID Adipose Breast Colon Heart Kidney Muscle Ovary Placenta
ENST00000522695 3.250±0.00 4.769±0.00 2.962±0.00 8.209±0.00 5.126±0.00 4.397±1.49 2.879±0.00 2.142±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001D6 CIL_0001D6_0001 CGP 8:73294612-73747708
CIL_0001NO CIL_0001NO_0001 CGP 8:73420369-73878854

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162627 Stau2-012 protein_coding Mus_musculus 0 2916
ENSMUST00000162435 Stau2-009 protein_coding Mus_musculus 0 2911
ENSMUST00000027052 Stau2-003 protein_coding Mus_musculus 0 2911
ENSMUST00000162751 Stau2-001 protein_coding Mus_musculus 0 2857
ENSMUST00000054668 Stau2-013 protein_coding Mus_musculus 0 2856
ENSMUST00000162007 Stau2-004 protein_coding Mus_musculus 0 1989
ENSMUST00000159558 Stau2-016 protein_coding Mus_musculus 0 1989
ENSMUST00000128957 Stau2-006 protein_coding Mus_musculus 0 1929
ENSMUST00000131257 Stau2-015 protein_coding Mus_musculus 0 1929
ENSMUST00000149320 Stau2-014 protein_coding Mus_musculus 0 1929
ENSMUST00000127420 Stau2-005 nonsense_mediated_decay Mus_musculus 0 1482
ENSMUST00000115360 Stau2-007 processed_transcript Mus_musculus 0 835
ENSMUST00000151888 Stau2-010 protein_coding Mus_musculus 0 324
ENSMUST00000145092 Stau2-011 protein_coding Mus_musculus 0 289
ENSMUST00000153966 Stau2-008 protein_coding Mus_musculus 0 254
ENSMUST00000115359 Stau2-002 protein_coding Mus_musculus 0 228
ENSMUST00000144138 Stau2-017 protein_coding Mus_musculus 0 228

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