C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interleukin enhancer binding factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115414 Ilf3-202 ENSMUSG00000032178 10090 + 9:21368019-21401803 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115414
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115414 4.363±1.81 2.539±0.00 4.109±0.00 11.098±7.40 2.574±0.45 1.740±0.18 1.946±0.41 1.604±0.09 2.424±1.83 2.824±0.00 1.300±0.38 13.145±4.14 7.377±2.72 6.584±0.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000492 CIL_000492_0002 CGP 9:21337828-21405361
CIL_0002S9 CIL_0002S9_0002 CGP 9:21368019-21420277

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 TAS DNA binding
GO:0005634 ISO nucleus
GO:0006479 ISA protein methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000250241 ILF3-003 protein_coding Homo_sapiens 0 2435
ENST00000407004 ILF3-001 protein_coding Homo_sapiens 0 3164
ENST00000449870 ILF3-201 protein_coding Homo_sapiens 0 2453
ENST00000585835 ILF3-020 nonsense_mediated_decay Homo_sapiens 0 697
ENST00000587505 ILF3-025 nonsense_mediated_decay Homo_sapiens 0 433
ENST00000587840 ILF3-026 nonsense_mediated_decay Homo_sapiens 0 739
ENST00000587928 ILF3-008 retained_intron Homo_sapiens 0 1611
ENST00000587941 ILF3-017 protein_coding Homo_sapiens 0 399
ENST00000588657 ILF3-006 protein_coding Homo_sapiens 0 2340
ENST00000589052 ILF3-024 nonsense_mediated_decay Homo_sapiens 0 457
ENST00000589173 ILF3-021 retained_intron Homo_sapiens 6e-33 145
ENST00000589416 ILF3-019 nonsense_mediated_decay Homo_sapiens 0 479
ENST00000589485 ILF3-018 nonsense_mediated_decay Homo_sapiens 0 654
ENST00000589600 ILF3-016 protein_coding Homo_sapiens 0 632
ENST00000589998 ILF3-002 protein_coding Homo_sapiens 0 2944
ENST00000590009 ILF3-014 protein_coding Homo_sapiens 0 1029
ENST00000590261 ILF3-005 protein_coding Homo_sapiens 0 2390
ENST00000592763 ILF3-004 protein_coding Homo_sapiens 0 2340
ENST00000593061 ILF3-022 protein_coding Homo_sapiens 0 252

Loading