C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interleukin enhancer binding factor 3, 90kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000407004 ILF3-001 ENSG00000129351 9606 + 19:10654328-10685765 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000407004
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000407004 14.321±0.00 29.938±0.00 1.362±0.00 7.679±6.13 9.384±4.54 7.813±5.65 6.460±4.95 8.897±5.77 2.992±1.07 5.827±4.51 7.969±0.00 24.648±14.75 17.245±4.29 21.291±5.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000492 CIL_000492_0001 CGP 19:10602457-10692417
CIL_0002S9 CIL_0002S9_0001 CGP 19:10654261-10713437

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003723 NAS RNA binding
GO:0003725 IDA double-stranded RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0006351 IEA transcription, DNA-templated
GO:0006468 IDA protein phosphorylation
GO:0016020 IDA membrane
GO:0017148 ISS negative regulation of translation
GO:0030529 IDA ribonucleoprotein complex
GO:0044822 IDA poly(A) RNA binding
GO:0045071 ISS negative regulation of viral genome replication
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0051607 IEA defense response to virus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115414 Ilf3-202 protein_coding Mus_musculus 0 3164
ENSMUST00000067646 Ilf3-201 protein_coding Mus_musculus 0 2453

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