C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: TMEM189-UBE2V1 readthrough
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000341698 TMEM189-UBE2V1-001 ENSG00000124208 9606 - 20:50081124-50153637 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000341698
Transcript ID Muscle
ENST00000341698 5.123±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087E CIL_00087E_0001 VISTA 20:49719805-50323644
CIL_0001TN CIL_0001TN_0001 CGP 20:49982999-50115959
CIL_0001PF CIL_0001PF_0001 CGP 20:50081124-50153637
CIL_00079R CIL_00079R_0001 CGP 20:50081124-50153734

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008152 IEA metabolic process
GO:0016881 IEA acid-amino acid ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125544 Gm20431-001 protein_coding Mus_musculus 0 1578
ENSMUST00000006587 Tmem189-001 protein_coding Mus_musculus 0 832
ENSMUST00000148262 Tmem189-002 processed_transcript Mus_musculus 0 730
ENSMUST00000121217 Gm6565-001 processed_pseudogene Mus_musculus 0 398
ENSMUST00000115777 Ube2v2-001 protein_coding Mus_musculus 0 398
ENSMUST00000096234 Ube2v2-003 protein_coding Mus_musculus 0 390
ENSMUST00000118984 Gm11843-001 processed_pseudogene Mus_musculus 0 322
ENSMUST00000117729 Gm13650-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000142148 Tmem189-004 retained_intron Mus_musculus 0 268

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