C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2 variant 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000340309 UBE2V1-003 ENSG00000244687 9606 - 20:50081124-50115954 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087E CIL_00087E_0001 VISTA 20:49719805-50323644
CIL_0001TN CIL_0001TN_0001 CGP 20:49982999-50115959
CIL_0001PF CIL_0001PF_0001 CGP 20:50081124-50153637
CIL_00079R CIL_00079R_0001 CGP 20:50081124-50153734

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IDA ubiquitin ligase complex
GO:0000209 TAS protein polyubiquitination
GO:0002224 TAS toll-like receptor signaling pathway
GO:0002755 TAS MyD88-dependent toll-like receptor signaling pathway
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005634 TAS nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006282 TAS regulation of DNA repair
GO:0006355 TAS regulation of transcription, DNA-templated
GO:0016881 IEA acid-amino acid ligase activity
GO:0030154 NAS cell differentiation
GO:0031371 IDA ubiquitin conjugating enzyme complex
GO:0031624 IEA ubiquitin conjugating enzyme binding
GO:0034134 TAS toll-like receptor 2 signaling pathway
GO:0034142 TAS toll-like receptor 4 signaling pathway
GO:0034146 TAS toll-like receptor 5 signaling pathway
GO:0034162 TAS toll-like receptor 9 signaling pathway
GO:0034166 TAS toll-like receptor 10 signaling pathway
GO:0035370 IDA UBC13-UEV1A complex
GO:0035872 TAS nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway
GO:0038095 TAS Fc-epsilon receptor signaling pathway
GO:0038123 TAS toll-like receptor TLR1:TLR2 signaling pathway
GO:0038124 TAS toll-like receptor TLR6:TLR2 signaling pathway
GO:0042275 IEA error-free postreplication DNA repair
GO:0043123 IMP positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043234 IDA protein complex
GO:0045087 TAS innate immune response
GO:0045893 TAS positive regulation of transcription, DNA-templated
GO:0050852 TAS T cell receptor signaling pathway
GO:0051092 IMP positive regulation of NF-kappaB transcription factor activity
GO:0070062 IDA extracellular vesicular exosome
GO:0070423 TAS nucleotide-binding oligomerization domain containing signaling pathway
GO:0070534 IDA protein K63-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000096234 Ube2v2-003 protein_coding Mus_musculus 0 392
ENSMUST00000121217 Gm6565-001 processed_pseudogene Mus_musculus 0 390
ENSMUST00000115777 Ube2v2-001 protein_coding Mus_musculus 0 390
ENSMUST00000118984 Gm11843-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000117729 Gm13650-001 processed_pseudogene Mus_musculus 0 291

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