C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: roundabout homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116586 Robo2-002 ENSMUSG00000052516 10090 - 16:73920206-74411785 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000116586
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000116586 0.979±0.88 0.153±0.10 0.320±0.06 6.001±1.83 0.310±0.22 0.788±0.04 0.133±0.01 1.158±0.15 0.175±0.09 1.995±0.07 0.017±0.00 1.186±0.27 0.165±0.05 0.091±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031Z CIL_00031Z_0002 CGP 16:72663149-74411825

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001656 IMP metanephros development
GO:0007411 IMP axon guidance
GO:0030673 IDA axolemma

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332191 ROBO2-003 protein_coding Homo_sapiens 0 4438
ENST00000461745 ROBO2-002 protein_coding Homo_sapiens 0 4907
ENST00000469233 ROBO2-011 processed_transcript Homo_sapiens 0 564
ENST00000471893 ROBO2-010 protein_coding Homo_sapiens 0 466
ENST00000473767 ROBO2-006 nonsense_mediated_decay Homo_sapiens 0 2316
ENST00000475334 ROBO2-012 protein_coding Homo_sapiens 0.000000000000004 86
ENST00000487694 ROBO2-013 protein_coding Homo_sapiens 0 4324
ENST00000490991 ROBO2-004 protein_coding Homo_sapiens 0 1376
ENST00000602589 ROBO2-001 protein_coding Homo_sapiens 0 3829
ENST00000614793 ROBO2-201 protein_coding Homo_sapiens 0 3952

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