C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: roundabout, axon guidance receptor, homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487694 ROBO2-013 ENSG00000185008 9606 + 3:75906695-77647510 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastLiverLungOvaryPlacentaTestisENST00000487694
Transcript ID Adipose Adrenal Brain Breast Liver Lung Ovary Placenta Testis
ENST00000487694 0.042±0.00 0.041±0.00 1.692±0.00 0.048±0.00 0.014±0.00 2.618±0.00 0.593±0.36 0.526±0.08 0.396±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001656 ISS metanephros development
GO:0001657 IMP ureteric bud development
GO:0005515 IPI:IEA protein binding
GO:0007156 IDA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007411 ISS axon guidance
GO:0007417 NAS central nervous system development
GO:0007420 IEP brain development
GO:0008046 ISS axon guidance receptor activity
GO:0009986 IDA cell surface
GO:0016021 IEA integral component of membrane
GO:0016199 ISS axon midline choice point recognition
GO:0021891 ISS olfactory bulb interneuron development
GO:0030673 ISS axolemma
GO:0031290 ISS retinal ganglion cell axon guidance
GO:0032870 IEP cellular response to hormone stimulus
GO:0042802 IDA identical protein binding
GO:0050772 IDA positive regulation of axonogenesis
GO:0050925 IDA negative regulation of negative chemotaxis
GO:0051964 ISS negative regulation of synapse assembly
GO:0061364 IEP apoptotic process involved in luteolysis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117200 Robo2-004 protein_coding Mus_musculus 0 6508
ENSMUST00000116586 Robo2-002 protein_coding Mus_musculus 0 4324
ENSMUST00000117785 Robo2-001 protein_coding Mus_musculus 0 3832
ENSMUST00000149114 Robo2-003 retained_intron Mus_musculus 0 1489
ENSMUST00000140062 Robo2-005 retained_intron Mus_musculus 0 745
ENSMUST00000138852 Robo2-008 retained_intron Mus_musculus 0 545
ENSMUST00000147408 Robo2-007 processed_transcript Mus_musculus 0 383
ENSMUST00000156010 Robo2-006 retained_intron Mus_musculus 0 374

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