C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11914
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117094 Gm11914-001 ENSMUSG00000082674 10090 - 4:27867149-27867655 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartKidneyLiverLungMusclePlacentaTestisENSMUST00000117094
Transcript ID Adipose Bladder Brain Heart Kidney Liver Lung Muscle Placenta Testis
ENSMUST00000117094 0.259±0.11 0.021±0.00 0.392±0.00 0.121±0.01 0.273±0.00 0.440±0.48 0.355±0.14 0.059±0.02 0.069±0.06 0.230±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007K2 CIL_0007K2_0002 UCNEbase 4:27088958-27988230

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358130 HMGN5-001 protein_coding Homo_sapiens 0 267
ENST00000373250 HMGN5-007 protein_coding Homo_sapiens 0 237
ENST00000430960 HMGN5-006 protein_coding Homo_sapiens 0 267
ENST00000447319 HMGN5-004 protein_coding Homo_sapiens 0 200
ENST00000491275 HMGN5-005 processed_transcript Homo_sapiens 0 237

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