C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: putative homeodomain transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117150 Phtf1-002 ENSMUSG00000058388 10090 + 3:103968110-104007488 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000117150
Transcript ID Adipose Bladder Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000117150 0.883±0.00 3.695±0.00 1.716±0.18 1.702±0.97 1.033±0.00 11.212±0.00 6.114±4.68 9.510±0.71

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357783 PHTF1-002 protein_coding Homo_sapiens 0 2532
ENST00000369598 PHTF1-011 protein_coding Homo_sapiens 0 2257
ENST00000369600 PHTF1-010 protein_coding Homo_sapiens 0 2627
ENST00000369604 PHTF1-001 protein_coding Homo_sapiens 0 3109
ENST00000393357 PHTF1-201 protein_coding Homo_sapiens 0 3109
ENST00000412670 PHTF1-004 protein_coding Homo_sapiens 0 1236
ENST00000446739 PHTF1-006 protein_coding Homo_sapiens 0 470
ENST00000472612 PHTF1-007 processed_transcript Homo_sapiens 0 372
ENST00000474926 PHTF1-003 processed_transcript Homo_sapiens 0 2257
ENST00000481652 PHTF1-009 processed_transcript Homo_sapiens 0 610
ENST00000493212 PHTF1-005 processed_transcript Homo_sapiens 0 209

Loading