C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: roundabout homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117200 Robo2-004 ENSMUSG00000052516 10090 - 16:73894355-74411292 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117200
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117200 1.809±1.22 0.150±0.08 0.887±0.04 14.039±3.87 0.319±0.13 1.290±0.41 0.083±0.00 2.150±0.51 0.470±0.30 2.259±0.52 0.037±0.03 1.850±1.06 0.239±0.07 0.025±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031Z CIL_00031Z_0002 CGP 16:72663149-74411825

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001656 IMP metanephros development
GO:0007411 IMP axon guidance
GO:0030673 IDA axolemma

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332191 ROBO2-003 protein_coding Homo_sapiens 0 4730
ENST00000461745 ROBO2-002 protein_coding Homo_sapiens 0 6892
ENST00000469233 ROBO2-011 processed_transcript Homo_sapiens 0 545
ENST00000470802 ROBO2-005 retained_intron Homo_sapiens 0 1897
ENST00000471893 ROBO2-010 protein_coding Homo_sapiens 0 466
ENST00000473767 ROBO2-006 nonsense_mediated_decay Homo_sapiens 0 4178
ENST00000475334 ROBO2-012 protein_coding Homo_sapiens 0 765
ENST00000487694 ROBO2-013 protein_coding Homo_sapiens 0 6508
ENST00000490534 ROBO2-008 protein_coding Homo_sapiens 0 475
ENST00000490991 ROBO2-004 protein_coding Homo_sapiens 0 1358
ENST00000602589 ROBO2-001 protein_coding Homo_sapiens 0 3807
ENST00000614793 ROBO2-201 protein_coding Homo_sapiens 0 6137

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