C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SR-related CTD-associated factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117282 Scaf1-003 ENSMUSG00000038406 10090 - 7:45002948-45014404 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117282
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117282 12.127±3.32 16.836±0.92 16.955±0.26 35.882±17.56 15.829±3.61 21.819±5.35 7.451±2.20 10.489±1.89 7.742±2.93 18.498±2.32 7.450±1.88 21.451±6.85 13.685±10.26 4.105±1.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0008380 IEA RNA splicing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360565 SCAF1-001 protein_coding Homo_sapiens 0 1869
ENST00000622360 SCAF1-201 protein_coding Homo_sapiens 0 1869

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