C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LPS-induced TN factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117360 Litaf-002 ENSMUSG00000022500 10090 - 16:10960824-10975579 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryENSMUST00000117360
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000117360 26.338±3.03 62.933±2.51 1.501±0.00 39.437±4.14 113.404±21.31 5.219±0.00 13.301±3.20 28.944±10.78 17.410±4.38 49.852±12.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043Q CIL_00043Q_0002 CGP 16:10835059-11066157
CIL_0007HQ CIL_0007HQ_0003 CGP 16:10959275-11074983

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001817 IMP regulation of cytokine production
GO:0004871 ISS signal transducer activity
GO:0005515 IPI protein binding
GO:0005765 ISO lysosomal membrane
GO:0005794 ISS Golgi apparatus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006915 IEA apoptotic process
GO:0032496 IMP response to lipopolysaccharide
GO:0042347 IMP negative regulation of NF-kappaB import into nucleus
GO:0043123 ISS positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0050699 ISS WW domain binding
GO:0071222 IMP cellular response to lipopolysaccharide

Homologs

No Homologs available.

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