C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatogenesis associated 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117445 Spata22-002 ENSMUSG00000069825 10090 + 11:73329741-73355913 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000117445
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000117445 0.043±0.01 0.194±0.06 0.011±0.00 0.005±0.00 0.139±0.08 0.033±0.00 0.024±0.01 0.031±0.02 0.267±0.12 0.045±0.02 0.053±0.03 0.010±0.00 0.451±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000711 IMP meiotic DNA repair synthesis
GO:0005575 ND cellular_component
GO:0007129 IMP synapsis
GO:0007276 IMP gamete generation
GO:0009566 IMP fertilization
GO:0051445 IMP regulation of meiotic cell cycle
GO:0061458 IMP reproductive system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000248384 OR1E2-001 protein_coding Homo_sapiens 0 800
ENST00000268981 SPATA22-003 protein_coding Homo_sapiens 0 568
ENST00000297913 OR1Q1-001 protein_coding Homo_sapiens 1e-16 92
ENST00000313447 OR8K5-001 protein_coding Homo_sapiens 0.00002 55
ENST00000319988 OR4S1-001 protein_coding Homo_sapiens 0.000000000004 77
ENST00000320048 OR4X1-201 protein_coding Homo_sapiens 0.000000002 68
ENST00000321265 NUDC-001 protein_coding Homo_sapiens 0.000000000000003 88
ENST00000322608 OR1E1-001 protein_coding Homo_sapiens 0 953
ENST00000332272 CHST6-003 protein_coding Homo_sapiens 0.00000000001 77
ENST00000340110 OR56A5-201 protein_coding Homo_sapiens 0.000001 58
ENST00000355380 SPATA22-002 protein_coding Homo_sapiens 0 560
ENST00000359688 OR13G1-001 protein_coding Homo_sapiens 0.00000000005 73
ENST00000395079 OR10W1-001 protein_coding Homo_sapiens 0.0000006 60
ENST00000397168 SPATA22-006 protein_coding Homo_sapiens 0 747
ENST00000412501 OR13D3P-001 unprocessed_pseudogene Homo_sapiens 0.000005 57
ENST00000427338 OR5K2-001 protein_coding Homo_sapiens 0.000005 57
ENST00000434991 OR4C10P-001 unprocessed_pseudogene Homo_sapiens 0.000001 58
ENST00000458235 JAK3-201 protein_coding Homo_sapiens 0.000000000000006 88
ENST00000461102 COQ4-002 processed_transcript Homo_sapiens 0.000000000000006 88
ENST00000466373 UFD1L-004 retained_intron Homo_sapiens 0.0000000000003 82
ENST00000472617 C1orf35-002 processed_transcript Homo_sapiens 0.0000000006 71
ENST00000502288 CLDND1-008 protein_coding Homo_sapiens 0.000003 57
ENST00000527670 JAK3-005 protein_coding Homo_sapiens 0.000000000000006 88
ENST00000532411 OR56A5-001 protein_coding Homo_sapiens 0.000001 58
ENST00000532898 OR4A4P-001 unprocessed_pseudogene Homo_sapiens 0.000005 57
ENST00000541913 SPATA22-014 protein_coding Homo_sapiens 0 560
ENST00000571553 SPATA22-011 protein_coding Homo_sapiens 0.0000000000002 81
ENST00000571607 SPATA22-010 protein_coding Homo_sapiens 0 316
ENST00000572582 SPATA22-007 protein_coding Homo_sapiens 0 374
ENST00000572969 SPATA22-004 protein_coding Homo_sapiens 0 747
ENST00000573128 SPATA22-005 protein_coding Homo_sapiens 0 747
ENST00000574051 SPATA22-009 protein_coding Homo_sapiens 1e-24 117
ENST00000574457 SPATA22-012 protein_coding Homo_sapiens 3.00018e-42 176
ENST00000575375 SPATA22-001 protein_coding Homo_sapiens 0 747
ENST00000575608 OR1E3-001 unprocessed_pseudogene Homo_sapiens 0 660
ENST00000577760 RPL23-007 retained_intron Homo_sapiens 0.0000000000003 82
ENST00000584912 RPL23-008 retained_intron Homo_sapiens 0.0000000000002 82
ENST00000610280 OR10Q2P-001 unprocessed_pseudogene Homo_sapiens 0.00002 55
ENST00000624144 OR4X1-202 protein_coding Homo_sapiens 0.000000002 68
ENST00000624797 OR4X1-001 polymorphic_pseudogene Homo_sapiens 0.000000002 68

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