C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane emp24 protein transport domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370282 TMED5-001 ENSG00000117500 9606 - 1:93149742-93180728 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000370282
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000370282 2.221±0.00 3.587±0.00 4.236±0.00 3.493±0.19 2.183±1.29 8.851±0.00 7.373±0.00 4.199±0.00 4.269±0.00 2.793±0.35 1.753±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZQ CIL_0005ZQ_0001 CGP 1:93079235-93180728
CIL_0005ZV CIL_0005ZV_0001 CGP 1:93149742-93278730

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005793 IDA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IEA Golgi apparatus
GO:0005801 IDA cis-Golgi network
GO:0006810 IEA transport
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0070971 IDA endoplasmic reticulum exit site
GO:0090161 IMP Golgi ribbon formation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002837 Tmed5-001 protein_coding Mus_musculus 0 915
ENSMUST00000119437 Tmed5-004 protein_coding Mus_musculus 0 532
ENSMUST00000119784 Tmed5-006 protein_coding Mus_musculus 0 324
ENSMUST00000117759 Tmed5-005 protein_coding Mus_musculus 0 324
ENSMUST00000118036 Tmed5-003 protein_coding Mus_musculus 0 324
ENSMUST00000061203 Tmed5-002 protein_coding Mus_musculus 0 324

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