C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: roundabout homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117785 Robo2-001 ENSMUSG00000052516 10090 - 16:73892306-74410989 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117785
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117785 0.840±0.00 0.145±0.00 6.998±6.02 0.128±0.03 0.495±0.09 0.015±0.00 0.636±0.00 0.189±0.06 0.857±0.05 0.014±0.00 0.523±0.10 0.046±0.00 0.010±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031Z CIL_00031Z_0002 CGP 16:72663149-74411825

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001656 IMP metanephros development
GO:0001657 IEA ureteric bud development
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007411 IMP axon guidance
GO:0007420 IEA brain development
GO:0009986 IEA cell surface
GO:0030673 IDA axolemma
GO:0032870 IEA cellular response to hormone stimulus
GO:0042802 IEA identical protein binding
GO:0050772 IEA positive regulation of axonogenesis
GO:0050925 IEA negative regulation of negative chemotaxis
GO:0061364 IEA apoptotic process involved in luteolysis
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332191 ROBO2-003 protein_coding Homo_sapiens 0 3947
ENST00000461745 ROBO2-002 protein_coding Homo_sapiens 0 3980
ENST00000469233 ROBO2-011 processed_transcript Homo_sapiens 0 545
ENST00000470802 ROBO2-005 retained_intron Homo_sapiens 0 1836
ENST00000471893 ROBO2-010 protein_coding Homo_sapiens 0 867
ENST00000473767 ROBO2-006 nonsense_mediated_decay Homo_sapiens 0 2180
ENST00000475334 ROBO2-012 protein_coding Homo_sapiens 0 527
ENST00000487694 ROBO2-013 protein_coding Homo_sapiens 0 3832
ENST00000490534 ROBO2-008 protein_coding Homo_sapiens 0 917
ENST00000490991 ROBO2-004 protein_coding Homo_sapiens 0 817
ENST00000602589 ROBO2-001 protein_coding Homo_sapiens 0 3783
ENST00000614793 ROBO2-201 protein_coding Homo_sapiens 0 3461

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