C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15289
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117793 Gm15289-001 ENSMUSG00000082258 10090 + 13:111361676-111361919 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000117793
Transcript ID Liver
ENSMUST00000117793 0.538±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089Y CIL_00089Y_0002 VISTA 13:111045678-111646779

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267950 ETFA-015 nonsense_mediated_decay Homo_sapiens 0 355
ENST00000433983 ETFA-002 protein_coding Homo_sapiens 0 355
ENST00000557943 ETFA-001 protein_coding Homo_sapiens 0 355
ENST00000557975 ETFA-018 retained_intron Homo_sapiens 9e-39 165
ENST00000558803 ETFA-009 retained_intron Homo_sapiens 0.000000000000003 86
ENST00000559075 ETFA-003 retained_intron Homo_sapiens 0 198
ENST00000559602 ETFA-014 protein_coding Homo_sapiens 0 355
ENST00000559758 ETFA-008 retained_intron Homo_sapiens 0.000000000000006 86
ENST00000559973 ETFA-017 protein_coding Homo_sapiens 0 327
ENST00000560044 ETFA-004 nonsense_mediated_decay Homo_sapiens 2e-24 117
ENST00000560179 ETFA-016 retained_intron Homo_sapiens 5e-39 165
ENST00000560345 ETFA-012 protein_coding Homo_sapiens 0.000000000003 77
ENST00000560595 ETFA-019 protein_coding Homo_sapiens 0 346
ENST00000560726 ETFA-006 protein_coding Homo_sapiens 0 355
ENST00000560816 ETFA-010 processed_transcript Homo_sapiens 0.000000000000009 84
ENST00000560899 ETFA-007 nonsense_mediated_decay Homo_sapiens 0 195
ENST00000565910 ETFA-020 nonsense_mediated_decay Homo_sapiens 5e-39 165

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