C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003A6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000044345-ENSDARG00000055912 CGP 7955 6:37603426-37693856
GeneTranscriptPositionBiotype
ENSDARG00000044345 (cyfip1)
cytoplasmic FMR1 interacting protein 1
ENSDART00000065127 (cyfip1-001) 37603426-37679255 protein_coding
ENSDART00000104233 (cyfip1-201) 37616889-37678597 protein_coding
ENSDART00000122199 (cyfip1-002) 37603426-37640562 protein_coding
ENSDART00000147898 (cyfip1-003) 37663620-37665458 processed_transcript
ENSDART00000151054 (cyfip1-004) 37673657-37674273 retained_intron
ENSDARG00000055912 (nipa2)
non imprinted in Prader-Willi/Angelman syndrome 2 (human)
ENSDART00000078316 (nipa2-001) 37681956-37693856 protein_coding
ENSDART00000149068 (nipa2-004) 37682674-37692072 protein_coding
ENSDART00000149722 (nipa2-002) 37682665-37692789 protein_coding
ENSDART00000150177 (nipa2-003) 37682798-37692778 protein_coding
CIL_0003A6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030447-ENSMUSG00000030452 CGP 10090 7:55841745-55962476
GeneTranscriptPositionBiotype
ENSMUSG00000030447 (Cyfip1)
cytoplasmic FMR1 interacting protein 1
ENSMUST00000032629 (Cyfip1-001) 55842071-55930700 protein_coding
ENSMUST00000085255 (Cyfip1-002) 55842206-55930498 protein_coding
ENSMUST00000163845 (Cyfip1-006) 55842255-55930471 protein_coding
ENSMUST00000168271 (Cyfip1-003) 55841745-55892431 protein_coding
ENSMUST00000173267 (Cyfip1-004) 55897074-55930498 retained_intron
ENSMUST00000173384 (Cyfip1-007) 55897819-55904255 retained_intron
ENSMUST00000173497 (Cyfip1-005) 55842250-55925786 retained_intron
ENSMUST00000173783 (Cyfip1-008) 55842072-55878003 protein_coding
ENSMUST00000174660 (Cyfip1-009) 55896745-55900840 retained_intron
ENSMUST00000174793 (Cyfip1-010) 55908372-55913712 retained_intron
ENSMUSG00000030452 (Nipa2)
non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)
ENSMUST00000032635 (Nipa2-001) 55931287-55962476 protein_coding
ENSMUST00000117812 (Nipa2-004) 55931287-55962439 protein_coding
ENSMUST00000119041 (Nipa2-007) 55931287-55962245 protein_coding
ENSMUST00000119201 (Nipa2-003) 55931287-55962450 protein_coding
ENSMUST00000126604 (Nipa2-009) 55935856-55962430 protein_coding
ENSMUST00000130239 (Nipa2-010) 55933515-55938068 retained_intron
ENSMUST00000135849 (Nipa2-002) 55941951-55962468 retained_intron
ENSMUST00000143325 (Nipa2-008) 55944610-55962173 protein_coding
ENSMUST00000147950 (Nipa2-006) 55933250-55962392 processed_transcript
ENSMUST00000152649 (Nipa2-005) 55935808-55962476 protein_coding
ENSMUSG00000092526 (Gm17907)
predicted gene, 17907
ENSMUST00000173150 (Gm17907-001) 55902602-55903311 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003A6_0001ENSDARG00000044345ENSDART00000065127ENSDART00000104233ENSDART00000122199ENSDART00000147898ENSDART00000151054ENSDARG00000055912ENSDART00000078316ENSDART00000149068ENSDART00000149722ENSDART00000150177CIL_0003A6_0002ENSMUSG00000030447ENSMUST00000032629ENSMUST00000085255ENSMUST00000163845ENSMUST00000168271ENSMUST00000173267ENSMUST00000173384ENSMUST00000173497ENSMUST00000173783ENSMUST00000174660ENSMUST00000174793ENSMUSG00000030452ENSMUST00000032635ENSMUST00000117812ENSMUST00000119041ENSMUST00000119201ENSMUST00000126604ENSMUST00000130239ENSMUST00000135849ENSMUST00000143325ENSMUST00000147950ENSMUST00000152649ENSMUSG00000092526ENSMUST00000173150
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003A6_0001ENSDARG00000044345ENSDART00000065127ENSDART00000104233ENSDARG00000055912ENSDART00000078316ENSDART00000149722CIL_0003A6_0002ENSMUSG00000030447ENSMUST00000032629ENSMUST00000085255ENSMUST00000163845ENSMUST00000173267ENSMUST00000173497ENSMUST00000174660ENSMUSG00000030452ENSMUST00000032635ENSMUST00000117812ENSMUST00000119041ENSMUST00000126604ENSMUST00000152649ENSMUSG00000092526ENSMUST00000173150
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000044345 ENSDART00000065127 N/A N/A N/A 6.544±2.99 N/A N/A 25.928±1.85 7.257±6.86 0.998±0.00 N/A 6.437±0.00 N/A N/A N/A
ENSDART00000104233 N/A N/A N/A N/A N/A N/A N/A N/A 0.448±0.00 N/A N/A N/A N/A N/A
ENSDART00000122199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000151054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000055912 ENSDART00000078316 N/A N/A N/A 3.021±1.99 N/A N/A 18.497±9.88 37.803±12.86 2.535±0.00 N/A 0.906±0.00 N/A N/A N/A
ENSDART00000149068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149722 N/A N/A N/A N/A N/A N/A 2.352±0.00 N/A N/A N/A 1.458±0.00 N/A N/A N/A
ENSDART00000150177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030447 ENSMUST00000032629 10.636±5.60 7.000±2.90 8.382±0.35 2.980±0.10 6.627±3.05 N/A 2.401±1.16 5.101±1.57 3.114±1.35 13.592±2.14 3.300±0.62 13.441±5.31 6.249±3.35 0.805±0.35
ENSMUST00000085255 5.152±0.67 12.161±5.34 3.652±0.00 9.011±1.64 7.192±0.51 13.532±3.24 2.833±0.12 6.004±1.07 2.573±1.94 5.157±1.07 0.828±0.06 11.024±3.31 5.535±2.80 1.584±0.28
ENSMUST00000163845 6.066±2.46 N/A 7.018±1.08 N/A 10.732±7.30 4.798±0.00 2.895±0.47 N/A 2.765±1.58 6.778±0.19 1.536±0.28 10.003±3.44 9.922±4.92 0.811±0.27
ENSMUST00000168271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173267 N/A N/A N/A 2.087±0.26 N/A 5.112±0.96 N/A N/A N/A N/A N/A N/A N/A 0.423±0.07
ENSMUST00000173384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173497 N/A 4.850±1.35 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.889±0.14 N/A N/A
ENSMUST00000173783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.652±0.00
ENSMUST00000174793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000030452 ENSMUST00000032635 4.124±0.80 5.847±0.45 11.144±1.13 9.814±0.09 2.070±0.16 6.273±3.14 5.040±0.46 4.553±1.20 5.861±2.50 4.711±0.66 5.854±1.72 3.701±1.61 7.678±6.82 3.020±0.87
ENSMUST00000117812 2.221±0.87 3.830±0.19 3.372±0.53 1.273±0.36 2.597±1.04 5.849±1.26 N/A 1.798±0.36 2.603±1.06 2.182±0.06 2.409±0.88 3.225±1.12 7.098±1.83 0.723±0.31
ENSMUST00000119041 N/A N/A N/A N/A 1.563±0.00 N/A N/A N/A N/A N/A 1.991±0.18 8.847±0.52 13.405±2.64 N/A
ENSMUST00000119201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126604 N/A N/A N/A 5.091±0.00 N/A N/A N/A N/A N/A N/A N/A 6.027±0.00 16.465±0.00 3.778±0.00
ENSMUST00000130239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152649 7.876±4.66 41.434±9.65 N/A N/A 17.905±8.14 33.736±6.22 N/A 5.099±1.17 4.765±1.72 10.165±5.56 N/A 25.549±6.68 N/A N/A
ENSMUSG00000092526 ENSMUST00000173150 0.523±0.20 N/A 0.898±0.00 0.629±0.01 0.411±0.13 0.263±0.09 0.096±0.06 0.129±0.07 0.135±0.05 0.330±0.07 0.136±0.07 0.968±0.43 0.405±0.10 0.111±0.08

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