C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13983
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118018 Gm13983-001 ENSMUSG00000084028 10090 - 2:118483313-118484177 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainKidneyLiverOvaryPlacentaTestisENSMUST00000118018
Transcript ID Adrenal Bladder Brain Kidney Liver Ovary Placenta Testis
ENSMUST00000118018 0.087±0.00 0.010±0.00 0.047±0.00 0.043±0.00 0.007±0.00 0.135±0.00 0.035±0.02 0.098±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W0 CIL_0008W0_0002 VISTA 2:118232227-118834856
CIL_0006QY CIL_0006QY_0002 CGP 2:118475850-118549687

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000285930 AKR1B1-001 protein_coding Homo_sapiens 0 438
ENST00000426422 AKR1B1-009 nonsense_mediated_decay Homo_sapiens 4e-24 115
ENST00000434222 AKR1B1-002 nonsense_mediated_decay Homo_sapiens 0 361
ENST00000465351 AKR1B1-003 retained_intron Homo_sapiens 0 361
ENST00000467829 AKR1B1-006 retained_intron Homo_sapiens 0 195
ENST00000484592 AKR1B1-011 retained_intron Homo_sapiens 0 195
ENST00000487438 AKR1B1-005 processed_transcript Homo_sapiens 0 215
ENST00000489022 AKR1B1-014 processed_transcript Homo_sapiens 0 195
ENST00000491741 AKR1B1-004 retained_intron Homo_sapiens 0 195
ENST00000497983 AKR1B1-013 processed_transcript Homo_sapiens 0 195
ENST00000498771 AKR1B1-010 retained_intron Homo_sapiens 0 361

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