C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aldo-keto reductase family 1, member B1 (aldose reductase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000434222 AKR1B1-002 ENSG00000085662 9606 - 7:134442386-134459102 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000434222
Transcript ID Colon
ENST00000434222 0.603±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002GW CIL_0002GW_0001 CGP 7:134289332-134459284
CIL_0002GX CIL_0002GX_0001 CGP 7:134442350-134541408

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122180 Gm12138-001 processed_pseudogene Mus_musculus 0 774
ENSMUST00000118494 Gm5400-001 processed_pseudogene Mus_musculus 0 676
ENSMUST00000121650 Gm5395-001 processed_pseudogene Mus_musculus 0 547
ENSMUST00000118018 Gm13983-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000186507 RP23-453N3.5-001 processed_pseudogene Mus_musculus 0 265
ENSMUST00000166583 Gm6736-201 processed_pseudogene Mus_musculus 0 265
ENSMUST00000102980 Akr1b3-001 protein_coding Mus_musculus 0 265
ENSMUST00000181879 Gm7678-001 processed_pseudogene Mus_musculus 0 204
ENSMUST00000142761 Akr1b3-005 retained_intron Mus_musculus 2e-32 145
ENSMUST00000117065 Gm12015-001 processed_pseudogene Mus_musculus 4e-29 134
ENSMUST00000139156 Akr1b10-002 nonsense_mediated_decay Mus_musculus 3e-20 104
ENSMUST00000115051 Akr1b10-004 protein_coding Mus_musculus 3e-20 104
ENSMUST00000038383 Akr1b10-001 protein_coding Mus_musculus 3e-20 104
ENSMUST00000007449 Akr1b7-001 protein_coding Mus_musculus 4e-19 100
ENSMUST00000150561 Gm13857-002 processed_transcript Mus_musculus 0.00000002 66

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