C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted pseudogene 8129
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118230 Gm8129-001 ENSMUSG00000059159 10090 - 6:52346730-52346942 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverPlacentaENSMUST00000118230
Transcript ID Bladder Brain Liver Placenta
ENSMUST00000118230 0.582±0.00 36.736±0.00 22.232±37.56 0.290±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OD CIL_0007OD_0003 UCNEbase 6:51462736-52602127
CIL_0008QL CIL_0008QL_0002 VISTA 6:51878169-52478777
CIL_000911 CIL_000911_0002 VISTA 6:51970433-52571615
CIL_000811 CIL_000811_0002 VISTA 6:52019082-52620287
CIL_00097P CIL_00097P_0002 VISTA 6:52142617-52744529
CIL_0003P6 CIL_0003P6_0002 CGP 6:52313498-52640389

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000145377 rpl38-002 protein_coding Danio_rerio 0 226
ENSDART00000021069 rpl38-001 protein_coding Danio_rerio 0 226

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