C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: R3H domain and coiled-coil containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118374 R3hcc1-001 ENSMUSG00000034194 10090 - 14:69697307-69707584 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118374
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118374 8.263±1.55 4.705±2.50 6.041±0.16 9.164±0.60 3.975±1.01 4.406±0.98 4.127±0.83 6.015±1.36 5.067±2.37 3.298±0.47 6.974±1.14 10.171±6.23 3.858±1.39 33.176±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YD CIL_0007YD_0002 VISTA 14:69222690-69823937
CIL_0008FQ CIL_0008FQ_0002 VISTA 14:69236074-69837250

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265806 R3HCC1-003 protein_coding Homo_sapiens 0 551
ENST00000411463 R3HCC1-201 protein_coding Homo_sapiens 0 551
ENST00000517633 R3HCC1-009 processed_transcript Homo_sapiens 3.00018e-42 174
ENST00000518454 R3HCC1-002 protein_coding Homo_sapiens 0 416
ENST00000518840 R3HCC1-004 protein_coding Homo_sapiens 0 531
ENST00000519952 R3HCC1-006 protein_coding Homo_sapiens 2e-39 167
ENST00000521588 R3HCC1-005 protein_coding Homo_sapiens 0 531
ENST00000522012 R3HCC1-001 processed_transcript Homo_sapiens 0 551

Loading