C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: R3H domain and coiled-coil containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000265806 R3HCC1-003 ENSG00000104679 9606 + 8:23287908-23296279 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonLiverOvaryPlacentaENST00000265806
Transcript ID Adipose Bladder Brain Breast Colon Liver Ovary Placenta
ENST00000265806 2.269±0.00 1.057±0.00 2.120±0.00 10.806±0.00 0.616±0.00 3.942±0.00 9.722±9.27 14.204±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FQ CIL_0008FQ_0001 VISTA 8:23193785-23795287
CIL_0007YD CIL_0007YD_0001 VISTA 8:23207989-23809472
CIL_00016U CIL_00016U_0002 CGP 8:23270120-23425328

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118374 R3hcc1-001 protein_coding Mus_musculus 0 551
ENSMUST00000121142 R3hcc1-002 protein_coding Mus_musculus 0 531

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