C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: R3H domain and coiled-coil containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000411463 R3HCC1-201 ENSG00000104679 9606 + 8:23287929-23296121 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000411463
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000411463 4.567±0.00 10.230±0.00 5.718±4.79 10.888±0.00 8.595±0.00 4.953±4.46 7.173±3.66 4.515±2.18 5.497±2.43 9.929±0.00 9.625±2.76 6.345±3.68 22.526±7.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FQ CIL_0008FQ_0001 VISTA 8:23193785-23795287
CIL_0007YD CIL_0007YD_0001 VISTA 8:23207989-23809472
CIL_00016U CIL_00016U_0002 CGP 8:23270120-23425328

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118374 R3hcc1-001 protein_coding Mus_musculus 0 551
ENSMUST00000121142 R3hcc1-002 protein_coding Mus_musculus 0 531

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