C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: topoisomerase (DNA) III beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118424 Top3b-007 ENSMUSG00000022779 10090 + 16:16870786-16885465 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLungMuscleOvaryPlacentaENSMUST00000118424
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Lung Muscle Ovary Placenta
ENSMUST00000118424 5.591±0.17 3.036±0.00 4.705±0.99 0.795±0.00 4.993±0.32 4.462±0.00 1.700±0.00 4.721±0.80 1.080±0.08 2.874±1.19 2.560±1.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PT CIL_0008PT_0002 VISTA 16:16870677-17470725

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357179 TOP3B-001 protein_coding Homo_sapiens 0 671
ENST00000398793 TOP3B-003 protein_coding Homo_sapiens 0 671
ENST00000424393 TOP3B-012 protein_coding Homo_sapiens 0 671
ENST00000430142 TOP3B-007 protein_coding Homo_sapiens 0 424
ENST00000437929 TOP3B-013 protein_coding Homo_sapiens 0 425
ENST00000444502 TOP3B-002 nonsense_mediated_decay Homo_sapiens 0 448
ENST00000457179 TOP3B-004 nonsense_mediated_decay Homo_sapiens 0 448
ENST00000457270 TOP3B-006 protein_coding Homo_sapiens 0 198

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