C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | topoisomerase (DNA) III beta | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000444502  |
TOP3B-002 |
ENSG00000100038 |
9606 | - |
22:21957031-21982790  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003KY | CIL_0003KY_0002 | CGP | 22:21919420-21982816 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0003917 | IEA | DNA topoisomerase type I activity |
| GO:0006265 | IEA | DNA topological change |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000119787
|
Top3b-004 | protein_coding | Mus_musculus | 0 | 1561 |
|
ENSMUST00000023465
|
Top3b-001 | protein_coding | Mus_musculus | 0 | 1561 |
|
ENSMUST00000156951
|
Top3b-021 | protein_coding | Mus_musculus | 0 | 1310 |
|
ENSMUST00000135597
|
Top3b-002 | retained_intron | Mus_musculus | 0 | 1042 |
|
ENSDART00000030553
|
top3b-201 | protein_coding | Danio_rerio | 0 | 725 |
|
ENSMUST00000139740
|
Top3b-003 | protein_coding | Mus_musculus | 0 | 555 |
|
ENSMUST00000128407
|
Top3b-015 | retained_intron | Mus_musculus | 0 | 507 |
|
ENSMUST00000150424
|
Top3b-008 | retained_intron | Mus_musculus | 0 | 507 |
|
ENSMUST00000156502
|
Top3b-020 | protein_coding | Mus_musculus | 0 | 448 |
|
ENSMUST00000118424
|
Top3b-007 | retained_intron | Mus_musculus | 0 | 448 |
|
ENSMUST00000124960
|
Top3b-017 | protein_coding | Mus_musculus | 0 | 412 |
|
ENSMUST00000124185
|
Top3b-012 | protein_coding | Mus_musculus | 0 | 412 |
|
ENSMUST00000151271
|
Top3b-013 | retained_intron | Mus_musculus | 0.000000000001 | 81 |
