C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 12717
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118427 Gm12717-001 ENSMUSG00000081696 10090 + 4:103940959-103941941 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000118427
Transcript ID Brain
ENSMUST00000118427 0.049±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 483
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 483
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 483
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 483
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 483
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 331
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 224
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 431
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 292
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 351
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 239
ENST00000449411 GAPDHP74-001 processed_pseudogene Homo_sapiens 2e-33 147
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 401
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 1e-29 135
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 483
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 483
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 261
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 193
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 211
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 2e-25 121
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 3.99931e-42 176
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 278
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 483

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