C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde-3-phosphate dehydrogenase pseudogene 74
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000449411 GAPDHP74-001 ENSG00000232780 9606 - 1:119434456-119435080 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartMuscleOvaryPlacentaTestisENST00000449411
Transcript ID Adipose Bladder Brain Colon Heart Muscle Ovary Placenta Testis
ENST00000449411 0.048±0.00 0.744±0.00 0.097±0.01 0.142±0.00 0.044±0.00 0.084±0.00 0.653±0.16 0.172±0.02 0.046±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IA CIL_0005IA_0001 CGP 1:119414931-119515054

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120200 Gm11557-001 processed_pseudogene Mus_musculus 0 398
ENSMUST00000182691 Gm7286-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000182240 Gm8907-001 processed_pseudogene Mus_musculus 0 364
ENSMUST00000120199 Gm12969-001 processed_pseudogene Mus_musculus 0 348
ENSMUST00000182893 Gm5313-001 processed_pseudogene Mus_musculus 0 346
ENSMUST00000117317 Gm5187-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000182020 Gm7481-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000180794 Gm5976-001 processed_pseudogene Mus_musculus 0 311
ENSMUST00000182707 Gm9061-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000181445 Gm7741-001 processed_pseudogene Mus_musculus 0 305
ENSMUST00000118177 Gm15294-001 translated_processed_pseudogene Mus_musculus 0 298
ENSMUST00000184486 Gm12117-001 translated_processed_pseudogene Mus_musculus 0 278
ENSMUST00000182057 Gm5350-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000182678 Gm7191-001 processed_pseudogene Mus_musculus 0 259
ENSMUST00000182235 Gm7745-001 processed_pseudogene Mus_musculus 0 259
ENSMUST00000117854 Gm13296-001 processed_pseudogene Mus_musculus 0 255
ENSMUST00000182857 Gm18822-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000118730 Gm13326-001 processed_pseudogene Mus_musculus 0 246
ENSMUST00000182082 Gm8957-001 processed_pseudogene Mus_musculus 0 237
ENSMUST00000182482 Gm9022-001 transcribed_processed_pseudogene Mus_musculus 0 226
ENSMUST00000118643 Gm14921-001 processed_pseudogene Mus_musculus 0 200
ENSMUST00000182302 Gm7132-001 processed_pseudogene Mus_musculus 0 198
ENSMUST00000183257 Gm7693-001 processed_pseudogene Mus_musculus 0 196
ENSMUST00000182394 Gm9522-001 processed_pseudogene Mus_musculus 1e-35 154
ENSMUST00000182990 Gm26970-001 processed_pseudogene Mus_musculus 1e-34 150
ENSMUST00000118427 Gm12717-001 processed_pseudogene Mus_musculus 2e-33 147
ENSMUST00000159905 Gm16296-001 processed_pseudogene Mus_musculus 8e-32 141
ENSMUST00000118675 Gm12684-001 processed_pseudogene Mus_musculus 2e-28 130
ENSMUST00000182528 Gm8614-001 processed_pseudogene Mus_musculus 6e-28 128
ENSMUST00000117238 Gm13761-001 processed_pseudogene Mus_musculus 6e-28 128

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