C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000513369 RP11-159J3.1-001 ENSG00000250982 9606 - 16:28239693-28240668 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000513369
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000513369 0.215±0.00 8.850±0.00 11.311±0.00 10.337±0.00 14.915±0.00 0.203±0.00 14.085±0.00 0.037±0.00 5.678±0.00 1.152±0.00 1.119±1.07 0.046±0.00 0.365±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TT CIL_0005TT_0001 CGP 16:28097979-28323849

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183305 Gm4654-001 processed_pseudogene Mus_musculus 0 983
ENSMUST00000100754 Gm2606-001 processed_pseudogene Mus_musculus 0 963
ENSMUST00000180167 Gm10359-001 processed_pseudogene Mus_musculus 0 957
ENSMUST00000119978 Gm12671-001 processed_pseudogene Mus_musculus 0 957
ENSMUST00000107041 Gm7336-201 processed_pseudogene Mus_musculus 0 957
ENSMUST00000073605 Gapdh-201 protein_coding Mus_musculus 0 957
ENSMUST00000118875 Gapdh-001 protein_coding Mus_musculus 0 957
ENSMUST00000117757 Gapdh-003 protein_coding Mus_musculus 0 957
ENSMUST00000121831 Gm14760-001 processed_pseudogene Mus_musculus 0 952
ENSMUST00000180654 Gm12033-001 processed_pseudogene Mus_musculus 0 952
ENSMUST00000119266 Gm12537-001 processed_pseudogene Mus_musculus 0 952
ENSMUST00000119551 Gm12070-001 processed_pseudogene Mus_musculus 0 952
ENSMUST00000180755 Gm5559-001 processed_pseudogene Mus_musculus 0 952
ENSMUST00000121658 Gm13394-001 processed_pseudogene Mus_musculus 0 952
ENSMUST00000113842 Gm5138-001 processed_pseudogene Mus_musculus 0 946
ENSMUST00000181051 Gm2574-001 processed_pseudogene Mus_musculus 0 946
ENSMUST00000179228 Gm10481-001 processed_pseudogene Mus_musculus 0 946
ENSMUST00000119246 Gm12286-001 processed_pseudogene Mus_musculus 0 941
ENSMUST00000181181 Gm3272-001 processed_pseudogene Mus_musculus 0 941
ENSMUST00000106443 Gm4609-001 processed_pseudogene Mus_musculus 0 935
ENSMUST00000180966 Gm20899-001 processed_pseudogene Mus_musculus 0 935
ENSMUST00000108740 Gm10358-201 processed_pseudogene Mus_musculus 0 935
ENSMUST00000182581 Gm4335-001 processed_pseudogene Mus_musculus 0 926
ENSMUST00000182339 Gm4691-001 transcribed_processed_pseudogene Mus_musculus 0 924
ENSMUST00000182989 Gm4691-002 processed_transcript Mus_musculus 0 924
ENSMUST00000076317 Gm10293-001 processed_pseudogene Mus_musculus 0 924
ENSMUST00000145057 Gm10284-001 processed_pseudogene Mus_musculus 0 924
ENSMUST00000077127 Gm3839-201 processed_pseudogene Mus_musculus 0 924
ENSMUST00000181173 Gm3839-001 protein_coding Mus_musculus 0 924
ENSMUST00000181493 Gm3200-001 processed_pseudogene Mus_musculus 0 918
ENSMUST00000105222 Gm10327-001 processed_pseudogene Mus_musculus 0 918
ENSMUST00000071282 Gm3222-201 processed_pseudogene Mus_musculus 0 917
ENSMUST00000166539 Gm2308-001 processed_pseudogene Mus_musculus 0 909
ENSMUST00000182991 Gm4575-001 processed_pseudogene Mus_musculus 0 902
ENSMUST00000094175 Gm10291-201 processed_pseudogene Mus_musculus 0 902
ENSMUST00000120911 Gm12416-001 processed_pseudogene Mus_musculus 0 896
ENSMUST00000086739 Gm10566-001 processed_pseudogene Mus_musculus 0 893
ENSMUST00000120886 Gm13882-001 processed_pseudogene Mus_musculus 0 891
ENSMUST00000182630 Gm2546-001 processed_pseudogene Mus_musculus 0 880
ENSMUST00000089534 Gm7293-201 protein_coding Mus_musculus 0 876
ENSMUST00000091897 Gm5507-001 processed_pseudogene Mus_musculus 0 874
ENSMUST00000121760 Gm5863-001 processed_pseudogene Mus_musculus 0 874
ENSMUST00000122433 Gm14148-001 processed_pseudogene Mus_musculus 0 869
ENSMUST00000087222 Gm3695-001 processed_pseudogene Mus_musculus 0 869
ENSMUST00000050581 Gm5069-002 protein_coding Mus_musculus 0 863
ENSMUST00000182522 Gm3534-001 processed_pseudogene Mus_musculus 0 863
ENSMUST00000099956 Gm8055-001 processed_pseudogene Mus_musculus 0 863
ENSMUST00000182720 Gm8349-001 processed_pseudogene Mus_musculus 0 863
ENSMUST00000182336 Gm5652-001 processed_pseudogene Mus_musculus 0 852
ENSMUST00000117933 Gm15191-001 processed_pseudogene Mus_musculus 0 850
ENSMUST00000182346 Gm9081-001 processed_pseudogene Mus_musculus 0 850
ENSMUST00000182463 Gm3671-001 processed_pseudogene Mus_musculus 0 845
ENSMUST00000120200 Gm11557-001 processed_pseudogene Mus_musculus 0 841
ENSMUST00000182456 Gm16470-001 processed_pseudogene Mus_musculus 0 839
ENSMUST00000182467 Gm6981-001 processed_pseudogene Mus_musculus 0 835
ENSMUST00000183053 Gm7507-001 processed_pseudogene Mus_musculus 0 830
ENSMUST00000182243 Gm4217-001 processed_pseudogene Mus_musculus 0 830
ENSMUST00000180415 Gm5523-001 processed_pseudogene Mus_musculus 0 826
ENSMUST00000180973 Gm3809-001 processed_pseudogene Mus_musculus 0 822
ENSMUST00000119851 Gm14111-001 processed_pseudogene Mus_musculus 0 819
ENSMUST00000183272 Gapdh-017 protein_coding Mus_musculus 0 809
ENSMUST00000122453 Gm12017-001 processed_pseudogene Mus_musculus 0 808
ENSMUST00000183246 Gm2193-001 processed_pseudogene Mus_musculus 0 804
ENSMUST00000118653 Gm8864-001 processed_pseudogene Mus_musculus 0 802
ENSMUST00000082064 Gm6316-001 processed_pseudogene Mus_musculus 0 797
ENSMUST00000119418 Gm13464-001 processed_pseudogene Mus_musculus 0 791
ENSMUST00000182565 Gm8825-001 processed_pseudogene Mus_musculus 0 791
ENSMUST00000118417 Gm14130-001 processed_pseudogene Mus_musculus 0 787
ENSMUST00000182524 Gm2076-001 processed_pseudogene Mus_musculus 0 787
ENSMUST00000117402 Gm7129-001 processed_pseudogene Mus_musculus 0 774
ENSMUST00000182754 Gm8330-001 processed_pseudogene Mus_musculus 0 774
ENSMUST00000181978 Gm8927-001 processed_pseudogene Mus_musculus 0 773
ENSMUST00000182638 Gm4518-001 processed_pseudogene Mus_musculus 0 765
ENSMUST00000122352 Gm11953-001 processed_pseudogene Mus_musculus 0 763
ENSMUST00000182021 Gm4929-001 processed_pseudogene Mus_musculus 0 754
ENSMUST00000182599 Gm6967-001 processed_pseudogene Mus_musculus 0 754
ENSMUST00000182150 Gm5210-001 processed_pseudogene Mus_musculus 0 749
ENSMUST00000182954 Gm8318-001 processed_pseudogene Mus_musculus 0 745
ENSMUST00000182906 Gm8100-001 processed_pseudogene Mus_musculus 0 717
ENSMUST00000183049 Gm5787-001 processed_pseudogene Mus_musculus 0 713
ENSMUST00000183329 Gm7985-001 processed_pseudogene Mus_musculus 0 688
ENSMUST00000183259 Gm8565-001 processed_pseudogene Mus_musculus 0 676
ENSMUST00000122207 Gm12864-001 processed_pseudogene Mus_musculus 0 671
ENSMUST00000064353 Gm8174-001 processed_pseudogene Mus_musculus 0 662
ENSMUST00000182893 Gm5313-001 processed_pseudogene Mus_musculus 0 660
ENSMUST00000182240 Gm8907-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000122068 Gm11960-001 transcribed_processed_pseudogene Mus_musculus 0 652
ENSMUST00000181063 Gm11960-002 processed_transcript Mus_musculus 0 652
ENSMUST00000118792 Gm18859-001 processed_pseudogene Mus_musculus 0 643
ENSMUST00000183288 Gm7833-001 processed_pseudogene Mus_musculus 0 641
ENSMUST00000118177 Gm15294-001 translated_processed_pseudogene Mus_musculus 0 641
ENSMUST00000122262 Gm6298-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000118643 Gm14921-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000182555 Gm8048-001 processed_pseudogene Mus_musculus 0 606
ENSMUST00000182176 Gm26956-001 processed_pseudogene Mus_musculus 0 571
ENSMUST00000182857 Gm18822-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000182882 Gm9211-001 processed_pseudogene Mus_musculus 0 555
ENSMUST00000181451 Gm8941-001 processed_pseudogene Mus_musculus 0 534
ENSMUST00000182472 Gm6114-001 processed_pseudogene Mus_musculus 0 534
ENSMUST00000182285 Gm9381-001 processed_pseudogene Mus_musculus 0 505
ENSMUST00000183151 Gm26977-001 processed_pseudogene Mus_musculus 0 479
ENSMUST00000116649 Gm12419-001 processed_pseudogene Mus_musculus 0 477
ENSMUST00000182069 Gm18848-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000122132 Gm14006-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000182390 Gm6216-001 processed_pseudogene Mus_musculus 0 353
ENSMUST00000182929 Gm26976-001 processed_pseudogene Mus_musculus 0 346
ENSMUST00000187802 RP24-369P14.2-001 processed_pseudogene Mus_musculus 0 324
ENSMUST00000182079 Gm15294-002 protein_coding Mus_musculus 0 320
ENSMUST00000183320 Gm8167-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000182783 Gm27005-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000118427 Gm12717-001 processed_pseudogene Mus_musculus 2e-25 121
ENSMUST00000186767 RP24-468E2.1-001 unprocessed_pseudogene Mus_musculus 2e-24 117

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