C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L18, pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118863 Rpl18-ps2-001 ENSMUSG00000053173 10090 + 6:128313357-128313923 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118863
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118863 4.097±1.70 0.480±0.21 0.216±0.01 0.654±0.44 4.898±1.89 2.457±1.50 0.630±0.22 0.947±0.66 0.446±0.52 2.121±0.37 0.145±0.01 6.929±5.42 0.217±0.04 1.048±0.52

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000084795 RPL18-006 protein_coding Homo_sapiens 0 678
ENST00000422478 RP11-709P2.1-001 processed_pseudogene Homo_sapiens 0 355
ENST00000478088 RPL18P13-001 processed_pseudogene Homo_sapiens 0 579
ENST00000486306 RP11-313M3.1-001 processed_pseudogene Homo_sapiens 0 331
ENST00000547892 RPL18-003 retained_intron Homo_sapiens 1e-22 113
ENST00000547897 RPL18-010 non_stop_decay Homo_sapiens 0 355
ENST00000549273 RPL18-014 protein_coding Homo_sapiens 0 575
ENST00000549370 RPL18-009 nonsense_mediated_decay Homo_sapiens 0 647
ENST00000549920 RPL18-001 protein_coding Homo_sapiens 0 682
ENST00000550645 RPL18-012 protein_coding Homo_sapiens 0 357
ENST00000550671 RPL18-007 retained_intron Homo_sapiens 2e-24 117
ENST00000550973 RPL18-013 protein_coding Homo_sapiens 0 643
ENST00000551749 RPL18-004 retained_intron Homo_sapiens 0 250
ENST00000552347 RPL18-005 retained_intron Homo_sapiens 0 250
ENST00000552705 RPL18-002 retained_intron Homo_sapiens 0 361

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