C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000084795 RPL18-006 ENSG00000063177 9606 - 19:48615331-48617884 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000084795
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000084795 439.707±0.00 609.237±0.00 38.176±0.00 108.411±49.25 266.219±135.53 391.205±234.04 23.791±0.00 266.980±134.72 80.741±3.40 146.509±45.59 131.066±33.92 1053.448±1080.09 1141.424±799.25 206.761±152.58

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072503 Rpl18-201 protein_coding Mus_musculus 0 710
ENSMUST00000135500 Rpl18-002 protein_coding Mus_musculus 0 710
ENSMUST00000075178 Rpl18-001 protein_coding Mus_musculus 0 710
ENSMUST00000118863 Rpl18-ps2-001 transcribed_processed_pseudogene Mus_musculus 0 678
ENSMUST00000120418 Gm13436-001 processed_pseudogene Mus_musculus 0 678
ENSMUST00000119837 Gm11539-001 processed_pseudogene Mus_musculus 0 580
ENSMUST00000119724 Gm12341-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000173098 Rpl18-007 protein_coding Mus_musculus 0 436
ENSMUST00000148510 Rpl18-003 retained_intron Mus_musculus 0 370
ENSMUST00000172506 Rpl18-008 retained_intron Mus_musculus 0 239

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