C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118976 Ccdc9-002 ENSMUSG00000041375 10090 - 7:16274045-16286790 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000118976
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000118976 2.591±0.39 4.622±0.00 6.151±1.70 2.292±0.09 3.412±0.27 2.397±0.00 1.422±0.00 1.380±0.82 2.070±0.31 3.797±1.29 5.086±1.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G1 CIL_0008G1_0002 VISTA 7:16104746-16706411

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000221922 CCDC9-001 protein_coding Homo_sapiens 0 1197
ENST00000595659 CCDC9-004 protein_coding Homo_sapiens 0 220
ENST00000596938 CCDC9-005 protein_coding Homo_sapiens 0 202
ENST00000599398 CCDC9-003 protein_coding Homo_sapiens 0 392
ENST00000600117 CCDC9-006 retained_intron Homo_sapiens 0 331

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