C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: activin A receptor, type II-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119063 Acvrl1-003 ENSMUSG00000000530 10090 + 15:101128922-101143640 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119063
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119063 15.475±4.92 3.767±1.18 10.299±1.03 0.733±0.00 6.871±1.36 3.350±0.00 3.342±1.04 4.817±0.96 0.873±0.44 79.049±18.99 1.693±0.30 9.068±2.81 9.072±7.80 0.644±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JX CIL_0006JX_0002 CGP 15:101115755-101145336
CIL_0006JY CIL_0006JY_0002 CGP 15:101128522-101213679

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IMP angiogenesis
GO:0001701 IMP in utero embryonic development
GO:0001937 IDA negative regulation of endothelial cell proliferation
GO:0001938 IDA positive regulation of endothelial cell proliferation
GO:0001946 IMP lymphangiogenesis
GO:0001974 IMP blood vessel remodeling
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0007179 IDA transforming growth factor beta receptor signaling pathway
GO:0030509 IMP BMP signaling pathway
GO:0030513 IDA positive regulation of BMP signaling pathway
GO:0042118 TAS endothelial cell activation
GO:0045602 IDA negative regulation of endothelial cell differentiation
GO:0045603 IDA positive regulation of endothelial cell differentiation
GO:0045766 IGI positive regulation of angiogenesis
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0048514 IMP blood vessel morphogenesis
GO:0060836 IMP lymphatic endothelial cell differentiation
GO:0060840 IMP artery development
GO:0060841 IMP venous blood vessel development
GO:0061298 IMP retina vasculature development in camera-type eye
GO:0071560 IDA cellular response to transforming growth factor beta stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000388922 ACVRL1-001 protein_coding Homo_sapiens 0 1574
ENST00000419526 ACVRL1-003 protein_coding Homo_sapiens 0 1072
ENST00000547632 ACVRL1-007 retained_intron Homo_sapiens 0 414
ENST00000550683 ACVRL1-002 protein_coding Homo_sapiens 0 1574
ENST00000552678 ACVRL1-008 protein_coding Homo_sapiens 0 483

Loading