C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006JY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139567-ENSG00000135503 CGP 9606 12:51906908-51997078
GeneTranscriptPositionBiotype
ENSG00000135503 (ACVR1B)
activin A receptor, type IB 		ENST00000257963 (ACVR1B-002) 51951667-51997078 protein_coding
ENST00000415850 (ACVR1B-003) 51951744-51987346 protein_coding
ENST00000426655 (ACVR1B-005) 51951702-51992341 protein_coding
ENST00000536420 (ACVR1B-006) 51951706-51976364 protein_coding
ENST00000541224 (ACVR1B-004) 51951701-51994217 protein_coding
ENST00000542485 (ACVR1B-001) 51953380-51994925 protein_coding
ENST00000563121 (ACVR1B-008) 51984035-51991992 processed_transcript
ENSG00000139567 (ACVRL1)
activin A receptor type II-like 1 		ENST00000388922 (ACVRL1-001) 51907418-51921069 protein_coding
ENST00000419526 (ACVRL1-003) 51912371-51921197 protein_coding
ENST00000547400 (ACVRL1-006) 51912329-51914561 protein_coding
ENST00000547632 (ACVRL1-007) 51915713-51919320 retained_intron
ENST00000550084 (ACVRL1-009) 51921652-51923361 processed_transcript
ENST00000550683 (ACVRL1-002) 51912332-51923359 protein_coding
ENST00000551576 (ACVRL1-005) 51906908-51913304 protein_coding
ENST00000552678 (ACVRL1-008) 51915448-51919342 protein_coding
ENSG00000206992 (RNU6-574P)
RNA, U6 small nuclear 574, pseudogene 		ENST00000384265 (RNU6-574P-201) 51987657-51987763 snRNA
CIL_0006JY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000000530-ENSMUSG00000000532 CGP 10090 15:101128522-101213679
GeneTranscriptPositionBiotype
ENSMUSG00000000530 (Acvrl1)
activin A receptor, type II-like 1 		ENSMUST00000000542 (Acvrl1-001) 101128522-101145336 protein_coding
ENSMUST00000117984 (Acvrl1-005) 101128574-101143638 protein_coding
ENSMUST00000119063 (Acvrl1-003) 101128922-101143640 protein_coding
ENSMUST00000120028 (Acvrl1-002) 101128551-101143639 protein_coding
ENSMUST00000120754 (Acvrl1-006) 101134133-101145336 protein_coding
ENSMUST00000121718 (Acvrl1-004) 101128924-101143638 protein_coding
ENSMUST00000124151 (Acvrl1-009) 101133415-101135462 protein_coding
ENSMUST00000128525 (Acvrl1-011) 101137600-101142624 processed_transcript
ENSMUST00000128868 (Acvrl1-010) 101135657-101137032 retained_intron
ENSMUST00000130432 (Acvrl1-008) 101128551-101135311 protein_coding
ENSMUST00000144229 (Acvrl1-007) 101128537-101134694 protein_coding
ENSMUSG00000000532 (Acvr1b)
activin A receptor, type 1B 		ENSMUST00000000544 (Acvr1b-001) 101174067-101213679 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JY_0001ENSG00000135503ENST00000257963ENST00000415850ENST00000426655ENST00000536420ENST00000541224ENST00000542485ENST00000563121ENSG00000139567ENST00000388922ENST00000419526ENST00000547400ENST00000547632ENST00000550084ENST00000550683ENST00000551576ENST00000552678ENSG00000206992ENST00000384265CIL_0006JY_0002ENSMUSG00000000530ENSMUST00000000542ENSMUST00000117984ENSMUST00000119063ENSMUST00000120028ENSMUST00000120754ENSMUST00000121718ENSMUST00000124151ENSMUST00000128525ENSMUST00000128868ENSMUST00000130432ENSMUST00000144229ENSMUSG00000000532ENSMUST00000000544
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JY_0001ENSG00000135503ENST00000257963ENST00000415850ENST00000426655ENST00000536420ENST00000541224ENST00000542485ENSG00000139567ENST00000388922ENST00000419526ENST00000550084ENST00000550683ENST00000551576ENST00000552678ENSG00000206992ENST00000384265CIL_0006JY_0002ENSMUSG00000000530ENSMUST00000000542ENSMUST00000117984ENSMUST00000119063ENSMUST00000120754ENSMUST00000128868ENSMUSG00000000532ENSMUST00000000544
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135503 ENST00000257963 7.427±0.00 4.697±0.00 N/A 10.910±7.02 6.605±0.00 4.234±2.04 2.067±0.00 13.254±12.56 2.778±1.78 3.425±2.78 5.719±0.00 8.641±1.88 4.657±0.57 11.525±3.01
ENST00000415850 N/A N/A N/A N/A N/A N/A N/A 1.053±0.00 1.187±0.00 1.309±0.00 N/A 1.817±0.00 N/A N/A
ENST00000426655 N/A N/A N/A N/A N/A N/A N/A 1.568±0.00 N/A N/A 2.120±0.00 N/A N/A N/A
ENST00000536420 N/A N/A N/A N/A N/A N/A 0.647±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000541224 N/A N/A N/A N/A N/A N/A N/A 1.348±0.00 N/A N/A N/A 2.511±0.00 N/A N/A
ENST00000542485 N/A N/A N/A N/A 1.651±0.00 N/A 0.110±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000563121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000139567 ENST00000388922 30.989±0.00 14.489±0.00 1.446±0.00 N/A 13.612±0.00 8.420±4.61 2.589±1.49 N/A 0.715±0.00 67.456±0.00 3.072±0.00 3.331±1.27 37.787±11.24 2.161±1.89
ENST00000419526 N/A N/A 0.984±0.00 1.116±0.00 4.271±0.00 2.964±0.00 1.403±0.00 0.655±0.00 2.196±0.00 9.353±0.00 1.837±0.00 2.582±0.00 N/A N/A
ENST00000547400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550084 N/A N/A N/A N/A N/A N/A N/A 2.424±0.00 N/A N/A N/A N/A N/A N/A
ENST00000550683 21.221±0.00 20.040±0.00 N/A 0.548±0.45 7.070±3.74 N/A N/A 0.142±0.00 0.642±0.00 11.830±8.79 1.386±0.00 2.575±0.79 49.379±9.98 1.137±0.54
ENST00000551576 N/A N/A N/A N/A N/A N/A N/A 3.076±0.00 N/A N/A N/A N/A N/A N/A
ENST00000552678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.103±0.00
ENSG00000206992 ENST00000384265 N/A N/A N/A 0.622±0.00 N/A N/A N/A N/A 52.173±0.00 0.748±0.00 N/A 2.379±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000530 ENSMUST00000000542 3.129±0.23 3.167±0.61 2.916±0.00 N/A 2.419±0.57 3.096±0.75 1.424±0.40 2.490±0.46 0.221±0.06 N/A 1.346±0.62 3.378±1.20 5.879±4.50 0.482±0.00
ENSMUST00000117984 9.090±1.76 5.731±1.11 10.524±1.32 1.362±0.51 6.718±2.40 7.318±1.79 4.831±2.20 4.750±0.43 0.607±0.18 81.791±29.38 1.214±0.30 8.582±2.91 17.561±20.42 0.566±0.12
ENSMUST00000119063 15.475±4.92 3.767±1.18 10.299±1.03 0.733±0.00 6.871±1.36 3.350±0.00 3.342±1.04 4.817±0.96 0.873±0.44 79.049±18.99 1.693±0.30 9.068±2.81 9.072±7.80 0.644±0.19
ENSMUST00000120028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000120754 8.160±0.92 2.071±0.00 14.031±0.45 1.942±0.38 4.557±1.42 7.244±0.94 2.715±0.55 1.967±0.67 0.489±0.30 118.862±6.00 1.718±0.00 5.476±1.95 11.792±8.51 0.467±0.09
ENSMUST00000121718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128868 N/A N/A N/A 12.570±0.00 N/A N/A N/A N/A N/A N/A N/A 33.775±0.00 190.721±0.00 2.865±0.00
ENSMUST00000130432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000000532 ENSMUST00000000544 11.152±0.77 7.034±0.68 12.089±3.32 17.772±5.53 15.092±2.29 44.126±5.76 6.666±0.64 16.706±3.46 4.117±1.12 29.758±0.21 15.002±5.33 12.750±4.50 5.815±1.59 7.082±2.82

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