C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L37
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000274242 RPL37-001 ENSG00000145592 9606 - 5:40825262-40835335 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000274242
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000274242 3.226±0.00 1.046±0.00 4.701±1.07 3.084±0.37 3.536±1.66 1.595±0.72 2.662±0.97 3.830±0.00 4.276±1.75 3.425±2.49 8.006±3.80 1.756±0.00 5.143±0.55

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 TAS RNA binding
GO:0003735 NAS:IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0006412 NAS:IEA translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0019843 IEA rRNA binding
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170206 Gm4468-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000118727 Gm12351-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000119948 Gm14593-001 processed_pseudogene Mus_musculus 0 331
ENSMUST00000120515 Gm16005-001 processed_pseudogene Mus_musculus 0 331
ENSMUST00000117174 Gm14816-001 processed_pseudogene Mus_musculus 0 313
ENSMUST00000118167 Gm14878-001 processed_pseudogene Mus_musculus 0 289
ENSMUST00000122411 Gm13868-001 processed_pseudogene Mus_musculus 0 285
ENSMUST00000121220 Gm13862-001 processed_pseudogene Mus_musculus 0 276
ENSMUST00000119090 Gm12788-001 processed_pseudogene Mus_musculus 0 248
ENSMUST00000190800 RP23-19M11.3-001 processed_pseudogene Mus_musculus 0 226
ENSMUST00000186142 RP24-469G14.1-001 processed_pseudogene Mus_musculus 0 204
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00004 57

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