C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15785
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119145 Gm15785-001 ENSMUSG00000082072 10090 - 6:149433780-149434473 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000119145
Transcript ID Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000119145 0.030±0.00 0.482±0.05 0.095±0.00 0.113±0.04 0.415±0.00 0.026±0.01 0.079±0.00 0.472±0.37 0.049±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00017G CIL_00017G_0002 CGP 6:149309414-149563329

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262177 DNAJB6-001 protein_coding Homo_sapiens 0 741
ENST00000405542 RP3-508D13.1-001 processed_pseudogene Homo_sapiens 0 195
ENST00000412557 DNAJB6-011 protein_coding Homo_sapiens 0 414
ENST00000413707 RP11-100E13.3-001 processed_pseudogene Homo_sapiens 0 374
ENST00000413963 RP11-300I6.5-001 processed_pseudogene Homo_sapiens 0 512
ENST00000417758 DNAJB6-009 protein_coding Homo_sapiens 0 726
ENST00000429029 DNAJB6-002 protein_coding Homo_sapiens 0 785
ENST00000432257 RP4-763G1.1-001 processed_pseudogene Homo_sapiens 0 532
ENST00000441291 DNAJB6-015 nonsense_mediated_decay Homo_sapiens 0 385
ENST00000441561 DNAJB6-008 protein_coding Homo_sapiens 0 472
ENST00000443280 DNAJB6-007 protein_coding Homo_sapiens 0 385
ENST00000452903 AC009502.1-001 processed_pseudogene Homo_sapiens 6e-29 132
ENST00000453383 DNAJB6-012 protein_coding Homo_sapiens 0 300
ENST00000459889 DNAJB6-004 retained_intron Homo_sapiens 0 741
ENST00000465908 DNAJB6-017 processed_transcript Homo_sapiens 0 359
ENST00000485817 RP11-775J23.2-001 processed_pseudogene Homo_sapiens 0 424
ENST00000486083 DNAJB6-020 processed_transcript Homo_sapiens 0 385
ENST00000487480 DNAJB6-005 retained_intron Homo_sapiens 0 405
ENST00000488001 DNAJB6-014 processed_transcript Homo_sapiens 0 385
ENST00000515686 RP11-14I17.1-001 processed_pseudogene Homo_sapiens 0 422
ENST00000526843 RP11-676M6.1-001 processed_pseudogene Homo_sapiens 0 750

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