C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12219
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119198 Gm12219-001 ENSMUSG00000080768 10090 - 11:53967063-53967505 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119198
Transcript ID Adipose Bladder Brain Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119198 0.125±0.00 0.585±0.03 0.078±0.05 0.413±0.31 0.245±0.01 0.219±0.13 0.136±0.00 0.202±0.16 1.066±0.67 0.398±0.47 0.444±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RF CIL_0007RF_0002 VISTA 11:53756663-54359415
CIL_00093D CIL_00093D_0002 VISTA 11:53760072-54361368
CIL_0000HR CIL_0000HR_0003 CGP 11:53864542-53980332
CIL_0000HR CIL_0000HR_0004 CGP 11:53949965-54028090

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382533 SAP18-001 protein_coding Homo_sapiens 0 440
ENST00000434334 AC013733.5-001 processed_pseudogene Homo_sapiens 0 309
ENST00000450573 SAP18-008 protein_coding Homo_sapiens 0 359
ENST00000467636 SAP18-005 protein_coding Homo_sapiens 0 278
ENST00000471009 SAP18-007 processed_transcript Homo_sapiens 0 307
ENST00000607003 SAP18-009 protein_coding Homo_sapiens 0 440
ENST00000621421 SAP18-201 protein_coding Homo_sapiens 0 440

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