Institute of Cardiovascular Regeneration Webtool Repository

Region Summary

Source ID	Type	Tax ID	Position
ENSDARG00000005335-ENSDARG00000094112	CGP	7955	21:44228126-44244536
Gene	Transcript	Position	Biotype
ENSDARG00000005335 (slc22a4) solute carrier family 22 (organic cation/ergothioneine transporter), member 4	ENSDART00000024342 (slc22a4-001)	44228126-44233848	protein_coding
	ENSDART00000138828 (slc22a4-003)	44228385-44230008	retained_intron
	ENSDART00000145081 (slc22a4-002)	44228321-44230105	retained_intron
ENSDARG00000094112 (slc22a21) solute carrier family 22 (organic cation transporter), member 21	ENSDART00000135034 (slc22a21-001)	44235268-44244536	protein_coding

CIL_0000HR_0002 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSG00000197208-ENSG00000197375	CGP	9606	5:132294443-132395614
Gene	Transcript	Position	Biotype
ENSG00000072682 (P4HA2) prolyl 4-hydroxylase, alpha polypeptide II	ENST00000166534 (P4HA2-003)	132192610-132227857	protein_coding
	ENST00000360568 (P4HA2-002)	132192610-132228082	protein_coding
	ENST00000379086 (P4HA2-004)	132192610-132227819	protein_coding
	ENST00000379100 (P4HA2-201)	132192613-132227242	protein_coding
	ENST00000379104 (P4HA2-202)	132192613-132227242	protein_coding
	ENST00000395164 (P4HA2-017)	132210490-132222091	protein_coding
	ENST00000401867 (P4HA2-001)	132191838-132227815	protein_coding
	ENST00000416053 (P4HA2-011)	132217223-132277600	protein_coding
	ENST00000417528 (P4HA2-010)	132210380-132227794	protein_coding
	ENST00000418055 (P4HA2-016)	132214041-132227835	protein_coding
	ENST00000428369 (P4HA2-009)	132213945-132227378	protein_coding
	ENST00000428841 (P4HA2-018)	132217779-132228258	protein_coding
	ENST00000431054 (P4HA2-014)	132210381-132295271	protein_coding
	ENST00000439698 (P4HA2-015)	132210441-132277855	protein_coding
	ENST00000453286 (P4HA2-005)	132213924-132227839	protein_coding
	ENST00000467587 (P4HA2-008)	132193041-132195730	retained_intron
	ENST00000471826 (P4HA2-013)	132248907-132295315	processed_transcript
	ENST00000474628 (P4HA2-007)	132192671-132195258	retained_intron
	ENST00000478055 (P4HA2-006)	132217197-132227262	retained_intron
	ENST00000481636 (P4HA2-012)	132277209-132277922	processed_transcript
	ENST00000506807 (P4HA2-019)	132192986-132193568	processed_transcript
ENSG00000197208 (SLC22A4) solute carrier family 22 (organic cation/zwitterion transporter), member 4	ENST00000200652 (SLC22A4-001)	132294443-132344206	protein_coding
	ENST00000425923 (SLC22A4-002)	132322184-132327385	processed_transcript
	ENST00000491257 (SLC22A4-003)	132295425-132320972	processed_transcript
ENSG00000197375 (SLC22A5) solute carrier family 22 (organic cation/carnitine transporter), member 5	ENST00000245407 (SLC22A5-001)	132369752-132395614	protein_coding
	ENST00000415928 (SLC22A5-004)	132370276-132387151	protein_coding
	ENST00000435065 (SLC22A5-201)	132369973-132394272	protein_coding
	ENST00000437841 (SLC22A5-008)	132369900-132389005	nonsense_mediated_decay
	ENST00000447841 (SLC22A5-005)	132388911-132394752	nonsense_mediated_decay
	ENST00000448810 (SLC22A5-002)	132385328-132393815	nonsense_mediated_decay
	ENST00000461013 (SLC22A5-006)	132376086-132395611	retained_intron
	ENST00000475308 (SLC22A5-003)	132388960-132395613	retained_intron
	ENST00000479605 (SLC22A5-007)	132387813-132393683	processed_transcript
ENSG00000233006 (AC034220.3)	ENST00000453876 (AC034220.3-004)	132349433-132352550	retained_intron
	ENST00000457998 (AC034220.3-005)	132366281-132369648	antisense
	ENST00000616965 (AC034220.3-002)	132332189-132360136	antisense
	ENST00000621103 (AC034220.3-001)	132311285-132369916	antisense
ENSG00000263597 (MIR3936) microRNA 3936	ENST00000584304 (MIR3936-201)	132365490-132365599	miRNA

CIL_0000HR_0003 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSMUSG00000018900-ENSMUSG00000063652	CGP	10090	11:53864542-53980332
Gene	Transcript	Position	Biotype
ENSMUSG00000018900 (Slc22a5) solute carrier family 22 (organic cation transporter), member 5	ENSMUST00000019044 (Slc22a5-001)	53864542-53891660	protein_coding
	ENSMUST00000136307 (Slc22a5-002)	53873679-53891595	nonsense_mediated_decay
	ENSMUST00000152084 (Slc22a5-003)	53865465-53871677	nonsense_mediated_decay
ENSMUSG00000063652 (Slc22a21) solute carrier family 22 (organic cation transporter), member 21	ENSMUST00000076493 (Slc22a21-001)	53949965-53980332	protein_coding
	ENSMUST00000124221 (Slc22a21-003)	53957974-53979870	nonsense_mediated_decay
	ENSMUST00000129301 (Slc22a21-002)	53950563-53953146	processed_transcript
	ENSMUST00000143352 (Slc22a21-004)	53958066-53969603	nonsense_mediated_decay
ENSMUSG00000080768 (Gm12219) predicted gene 12219	ENSMUST00000119198 (Gm12219-001)	53967063-53967505	processed_pseudogene
ENSMUSG00000081098 (Gm12220) predicted gene 12220	ENSMUST00000118476 (Gm12220-001)	53929305-53929476	unprocessed_pseudogene
ENSMUSG00000082271 (Gm12217) predicted gene 12217	ENSMUST00000118858 (Gm12217-001)	53902190-53903568	processed_pseudogene
ENSMUSG00000082380 (Gm12218) predicted gene 12218	ENSMUST00000117666 (Gm12218-001)	53902757-53903155	processed_pseudogene

CIL_0000HR_0004 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSMUSG00000063652-ENSMUSG00000020334	CGP	10090	11:53949965-54028090
Gene	Transcript	Position	Biotype
ENSMUSG00000020334 (Slc22a4) solute carrier family 22 (organic cation transporter), member 4	ENSMUST00000020586 (Slc22a4-001)	53983123-54028090	protein_coding
	ENSMUST00000146351 (Slc22a4-002)	53992059-54007964	processed_transcript
	ENSMUST00000154369 (Slc22a4-003)	54014260-54027952	processed_transcript
ENSMUSG00000063652 (Slc22a21) solute carrier family 22 (organic cation transporter), member 21	ENSMUST00000076493 (Slc22a21-001)	53949965-53980332	protein_coding
	ENSMUST00000124221 (Slc22a21-003)	53957974-53979870	nonsense_mediated_decay
	ENSMUST00000129301 (Slc22a21-002)	53950563-53953146	processed_transcript
	ENSMUST00000143352 (Slc22a21-004)	53958066-53969603	nonsense_mediated_decay
ENSMUSG00000080768 (Gm12219) predicted gene 12219	ENSMUST00000119198 (Gm12219-001)	53967063-53967505	processed_pseudogene

Expression Patterns

Heat Map

Heat Map (Expressed Only)

Numeric Values

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSDARG00000005335

ENSDART00000024342

N/A

0.234±0.00

N/A

0.177±0.14

1.393±0.00

0.022±0.00

N/A

0.845±0.00

N/A

ENSDART00000138828

N/A

ENSDART00000145081

N/A

0.088±0.00

N/A

10.598±0.00

N/A

ENSDARG00000094112

ENSDART00000135034

N/A

3.981±1.38

N/A

0.046±0.00

8.206±0.00

N/A

1.164±0.00

N/A

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSG00000072682

ENST00000166534

3.400±0.00

N/A

2.971±0.00

1.066±0.13

3.876±0.20

2.446±1.25

3.453±0.04

N/A

5.467±1.51

0.759±0.00

4.898±2.38

4.424±0.00

5.111±1.16

ENST00000360568

4.402±0.00

5.157±0.00

N/A

1.822±0.13

7.284±0.00

17.489±0.00

8.496±0.00

11.146±0.00

1.482±0.27

13.856±0.00

1.601±0.00

4.157±0.82

14.004±1.99

6.975±2.74

ENST00000379086

N/A

4.321±0.00

N/A

4.023±3.03

6.704±0.00

3.445±0.00

4.446±0.00

4.738±2.58

12.991±0.63

N/A

ENST00000379100

N/A

0.790±0.00

1.024±0.00

N/A

ENST00000379104

N/A

ENST00000395164

N/A

ENST00000401867

N/A

0.473±0.00

N/A

0.976±0.00

N/A

1.628±0.70

2.595±0.11

1.735±0.00

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

1.816±0.00

N/A

ENST00000478055

N/A

ENST00000481636

N/A

ENST00000506807

N/A

ENSG00000197208

ENST00000200652

N/A

1.916±0.00

N/A

0.641±0.00

N/A

4.654±0.00

N/A

2.834±1.79

1.149±0.10

N/A

ENST00000425923

N/A

ENST00000491257

N/A

ENSG00000197375

ENST00000245407

0.701±0.00

N/A

1.603±0.00

4.716±0.00

2.049±0.91

3.388±0.00

32.853±0.00

0.984±0.00

2.191±0.00

14.866±0.00

2.191±1.77

3.331±0.48

2.867±1.03

N/A

N/A

N/A

N/A

N/A

2.504±0.00

N/A

ENST00000461013

N/A

1.790±0.00

0.290±0.00

0.551±0.00

0.202±0.00

0.268±0.15

N/A

0.189±0.08

N/A

0.185±0.00

N/A

ENST00000475308

N/A

1.021±0.00

N/A

0.614±0.00

N/A

1.275±0.00

N/A

0.908±0.00

ENST00000479605

N/A

ENSG00000233006

ENST00000453876

N/A

4.015±0.00

N/A

ENST00000457998

N/A

ENST00000616965

N/A

ENST00000621103

N/A

ENSG00000263597

ENST00000584304

N/A

0.476±0.00

N/A

3.060±0.00

0.734±0.00

N/A

8.790±8.58

2.612±0.00

N/A

14.448±0.00

4.121±0.00

3.840±2.07

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSMUSG00000018900

ENSMUST00000019044

6.813±1.67

19.922±5.95

13.891±0.27

4.662±0.86

8.823±3.03

10.242±2.36

6.618±1.45

73.318±10.81

4.006±2.78

8.558±0.73

2.124±0.85

11.826±5.78

24.252±11.41

7.540±3.88

ENSMUST00000136307

N/A

3.974±0.00

ENSMUST00000152084

N/A

1.498±0.00

N/A

3.648±0.00

16.777±0.00

N/A

ENSMUSG00000063652

ENSMUST00000076493

0.538±0.14

1.082±0.45

4.871±0.15

0.427±0.25

0.401±0.00

1.960±1.26

0.180±0.04

1.020±0.14

0.631±0.45

0.529±0.35

0.117±0.05

1.117±0.72

0.915±0.50

27.827±13.24

ENSMUST00000124221

N/A

0.084±0.01

N/A

0.120±0.00

0.557±0.00

0.901±0.08

4.816±0.00

ENSMUST00000129301

N/A

3.282±0.46

0.244±0.00

0.873±0.00

N/A

0.897±0.26

N/A

0.224±0.08

1.038±0.10

0.867±0.23

4.482±0.00

ENSMUST00000143352

N/A

0.230±0.04

1.100±0.23

N/A

1.042±0.36

N/A

0.748±0.00

0.871±0.12

5.411±0.00

ENSMUSG00000080768

ENSMUST00000119198

0.125±0.00

N/A

0.585±0.03

0.078±0.05

N/A

0.413±0.31

N/A

0.245±0.01

0.219±0.13

0.136±0.00

0.202±0.16

1.066±0.67

0.398±0.47

0.444±0.20

ENSMUSG00000081098

ENSMUST00000118476

N/A

10.302±0.00

N/A

113.178±0.00

N/A

3.111±0.00

ENSMUSG00000082271

ENSMUST00000118858

0.054±0.00

N/A

0.014±0.00

N/A

0.216±0.07

N/A

0.225±0.19

N/A

0.088±0.03

0.111±0.09

0.075±0.02

ENSMUSG00000082380

ENSMUST00000117666

N/A

0.073±0.04

N/A

0.184±0.11

N/A

0.384±0.32

N/A

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSMUSG00000020334

ENSMUST00000020586

7.078±2.64

4.644±0.58

0.993±0.29

0.705±0.24

5.999±2.13

0.463±0.11

1.072±0.55

23.131±2.84

8.960±8.71

0.821±0.29

0.667±0.28

1.020±0.42

8.719±8.08

0.622±0.10

ENSMUST00000146351

N/A

0.421±0.00

1.442±0.00

N/A

1.089±0.34

N/A

ENSMUST00000154369

N/A

3.533±0.00

N/A

1.237±0.55

14.395±5.94

N/A

ENSMUSG00000063652

ENSMUST00000076493

0.538±0.14

1.082±0.45

4.871±0.15

0.427±0.25

0.401±0.00

1.960±1.26

0.180±0.04

1.020±0.14

0.631±0.45

0.529±0.35

0.117±0.05

1.117±0.72

0.915±0.50

27.827±13.24

ENSMUST00000124221

N/A

0.084±0.01

N/A

0.120±0.00

0.557±0.00

0.901±0.08

4.816±0.00

ENSMUST00000129301

N/A

3.282±0.46

0.244±0.00

0.873±0.00

N/A

0.897±0.26

N/A

0.224±0.08

1.038±0.10

0.867±0.23

4.482±0.00

ENSMUST00000143352

N/A

0.230±0.04

1.100±0.23

N/A

1.042±0.36

N/A

0.748±0.00

0.871±0.12

5.411±0.00

ENSMUSG00000080768

ENSMUST00000119198

0.125±0.00

N/A

0.585±0.03

0.078±0.05

N/A

0.413±0.31

N/A

0.245±0.01

0.219±0.13

0.136±0.00

0.202±0.16

1.066±0.67

0.398±0.47

0.444±0.20

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

Expression Patterns

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