C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 2-oxoglutarate and iron-dependent oxygenase domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119269 Ogfod2-002 ENSMUSG00000023707 10090 + 5:124112321-124115476 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119269
Transcript ID Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119269 5.037±0.00 5.431±0.18 3.068±0.40 1.317±0.34 4.414±0.00 1.001±0.08 4.607±0.92 3.165±1.64 4.029±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0002 VISTA 5:123871507-124476501
CIL_0002PC CIL_0002PC_0002 CGP 5:124061530-124115483
CIL_0002P6 CIL_0002P6_0002 CGP 5:124112297-124118196

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228922 OGFOD2-006 protein_coding Homo_sapiens 0 442
ENST00000397389 OGFOD2-001 protein_coding Homo_sapiens 0 442
ENST00000406539 OGFOD2-014 retained_intron Homo_sapiens 0 442
ENST00000454694 OGFOD2-008 protein_coding Homo_sapiens 0 442
ENST00000536150 OGFOD2-009 protein_coding Homo_sapiens 0 442
ENST00000536439 OGFOD2-020 protein_coding Homo_sapiens 0 363
ENST00000538628 OGFOD2-011 protein_coding Homo_sapiens 0 442
ENST00000538755 OGFOD2-007 protein_coding Homo_sapiens 0 442
ENST00000540324 OGFOD2-002 nonsense_mediated_decay Homo_sapiens 0 442
ENST00000542678 ABCB9-001 protein_coding Homo_sapiens 2e-36 159
ENST00000545056 OGFOD2-004 protein_coding Homo_sapiens 0 363
ENST00000545317 OGFOD2-003 protein_coding Homo_sapiens 0 442
ENST00000545396 OGFOD2-013 retained_intron Homo_sapiens 0 207
ENST00000545612 OGFOD2-010 protein_coding Homo_sapiens 0 442

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