C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5380
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119296 Gm5380-001 ENSMUSG00000081255 10090 + X:13302285-13304420 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000119296
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000119296 0.032±0.02 0.076±0.03 0.004±0.00 0.019±0.01 0.047±0.02 0.017±0.00 0.020±0.00 0.010±0.01 0.025±0.00 0.065±0.05 0.007±0.00 0.031±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LW CIL_0007LW_0002 UCNEbase X:13169486-13522078
CIL_0001X4 CIL_0001X4_0003 CGP X:13280970-13489313

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258091 CCT7-001 protein_coding Homo_sapiens 0 292
ENST00000399032 CCT7-003 protein_coding Homo_sapiens 0 283
ENST00000461290 CCT7-011 retained_intron Homo_sapiens 0 292
ENST00000469844 CCT7-004 processed_transcript Homo_sapiens 0 283
ENST00000471927 CCT7-007 processed_transcript Homo_sapiens 0 283
ENST00000473197 CCT7-006 processed_transcript Homo_sapiens 0 283
ENST00000480489 CCT7-012 retained_intron Homo_sapiens 0 292
ENST00000482064 CCT7-008 processed_transcript Homo_sapiens 0 283
ENST00000492253 CCT7-005 processed_transcript Homo_sapiens 0 281
ENST00000539919 CCT7-201 protein_coding Homo_sapiens 0 283

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