C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L23A, pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119375 Rpl23a-ps2-001 ENSMUSG00000081968 10090 + 11:70879428-70879901 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartKidneyLiverOvaryPlacentaENSMUST00000119375
Transcript ID Adrenal Bladder Brain Breast Heart Kidney Liver Ovary Placenta
ENSMUST00000119375 0.268±0.01 0.092±0.01 0.120±0.05 0.162±0.00 0.106±0.00 0.168±0.05 0.113±0.08 0.396±0.05 0.201±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020X CIL_00020X_0002 CGP 11:70790932-70943105
CIL_00060J CIL_00060J_0003 CGP 11:70844778-70969973

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000397284 AC012501.1-001 processed_pseudogene Homo_sapiens 0 219
ENST00000413895 AC023271.2-001 processed_pseudogene Homo_sapiens 1.99993e-41 172
ENST00000455252 RPL23AP81-001 transcribed_processed_pseudogene Homo_sapiens 0 224
ENST00000606979 RP3-511B24.5-001 transcribed_processed_pseudogene Homo_sapiens 2e-30 135

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