C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 14586
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119571 Gm14586-001 ENSMUSG00000083621 10090 - X:52772342-52772749 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119571
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119571 5.639±1.33 2.135±0.92 14.449±5.94 4.689±3.29 3.691±2.32 5.159±3.50 3.713±0.99 6.702±2.95 11.187±6.86 2.813±0.88 1.479±0.33 3.850±2.53 1.302±1.15 4.154±0.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SR CIL_0000SR_0002 CGP X:52272426-52799468

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000067866 RPS17 (2 of 2)-201 protein_coding Danio_rerio 0 374
ENSDART00000155055 RPS17 (2 of 2)-001 protein_coding Danio_rerio 0 374
ENSDART00000153983 RPS17 (2 of 2)-005 protein_coding Danio_rerio 0 370
ENSDART00000156976 RPS17 (2 of 2)-002 protein_coding Danio_rerio 0 368
ENSDART00000157321 RPS17 (2 of 2)-003 processed_transcript Danio_rerio 0 259
ENSDART00000156469 RPS17 (2 of 2)-006 protein_coding Danio_rerio 0 248
ENST00000330244 RPS17-001 protein_coding Homo_sapiens 0 496
ENST00000506193 RP11-478C6.4-001 processed_pseudogene Homo_sapiens 7e-36 152
ENST00000558397 RPS17-009 non_stop_decay Homo_sapiens 0 398
ENST00000559273 RPS17-006 retained_intron Homo_sapiens 0 209
ENST00000559776 RPS17-008 retained_intron Homo_sapiens 0 327
ENST00000560229 RPS17-002 retained_intron Homo_sapiens 0 492
ENST00000560612 RPS17-003 retained_intron Homo_sapiens 0 394
ENST00000560639 RPS17-007 retained_intron Homo_sapiens 0 331
ENST00000561068 RPS17-010 nonsense_mediated_decay Homo_sapiens 0 291
ENST00000561157 RPS17-005 protein_coding Homo_sapiens 0 398
ENST00000561440 RPS17-004 retained_intron Homo_sapiens 0 206
ENST00000617731 RPS17L-201 protein_coding Homo_sapiens 0 496

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