C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000506193 RP11-478C6.4-001 ENSG00000250321 9606 - 4:342821-342962 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLungMuscleOvaryTestisENST00000506193
Transcript ID Adipose Adrenal Brain Breast Kidney Lung Muscle Ovary Testis
ENST00000506193 0.136±0.00 1.559±0.00 0.144±0.00 0.284±0.00 0.140±0.00 3.967±0.00 0.381±0.00 6.242±0.00 0.253±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CF CIL_0006CF_0001 CGP 4:337814-499156

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119032 Gm12034-001 processed_pseudogene Mus_musculus 2e-37 158
ENSMUST00000119571 Gm14586-001 processed_pseudogene Mus_musculus 7e-36 152
ENSMUST00000130487 Rps17-005 processed_transcript Mus_musculus 7e-36 152
ENSMUST00000134425 Rps17-002 retained_intron Mus_musculus 7e-36 152
ENSMUST00000080813 Rps17-001 protein_coding Mus_musculus 7e-36 152

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