C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12577
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119701 Gm12577-001 ENSMUSG00000083834 10090 - 4:58483252-58483825 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainLiverOvaryPlacentaTestisENSMUST00000119701
Transcript ID Adipose Bladder Brain Liver Ovary Placenta Testis
ENSMUST00000119701 0.139±0.00 0.251±0.00 0.079±0.01 0.076±0.08 0.148±0.06 0.162±0.10 1.266±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016H CIL_00016H_0002 CGP 4:58285960-58553898
CIL_00093E CIL_00093E_0002 VISTA 4:58366631-58972430
CIL_00016L CIL_00016L_0002 CGP 4:58435255-58785720

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331738 RSRC2-001 protein_coding Homo_sapiens 0 468
ENST00000344591 RSRC2-013 protein_coding Homo_sapiens 0 496
ENST00000433877 RSRC2-019 nonsense_mediated_decay Homo_sapiens 0 496
ENST00000524399 RSRC2-018 retained_intron Homo_sapiens 0 226
ENST00000525335 RSRC2-010 retained_intron Homo_sapiens 0 442
ENST00000527173 RSRC2-003 retained_intron Homo_sapiens 0 468
ENST00000527796 RSRC2-005 retained_intron Homo_sapiens 0 429
ENST00000528263 RSRC2-012 nonsense_mediated_decay Homo_sapiens 0 440
ENST00000532695 RSRC2-002 nonsense_mediated_decay Homo_sapiens 0 468

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