C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: arginine/serine-rich coiled-coil 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000331738 RSRC2-001 ENSG00000111011 9606 - 12:122503458-122526999 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000331738
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000331738 2.374±0.00 1.178±0.00 3.053±0.00 3.132±1.06 1.977±0.00 1.497±0.64 4.728±0.00 1.190±0.00 2.599±0.58 2.392±0.00 4.519±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PD CIL_0002PD_0001 CGP 12:122472870-122527000
CIL_0002PE CIL_0002PE_0001 CGP 12:122503458-122626396

Gene Ontology

GO IDEvidence TypeGO Description
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057795 Rsrc2-201 protein_coding Mus_musculus 0 2084
ENSMUST00000050827 Rsrc2-010 protein_coding Mus_musculus 0 2084
ENSMUST00000182948 Rsrc2-004 processed_transcript Mus_musculus 0 2032
ENSMUST00000182309 Rsrc2-001 protein_coding Mus_musculus 0 1965
ENSMUST00000182955 Rsrc2-013 protein_coding Mus_musculus 0 1923
ENSMUST00000182489 Rsrc2-017 protein_coding Mus_musculus 0 1655
ENSMUST00000182861 Rsrc2-002 nonsense_mediated_decay Mus_musculus 0 1482
ENSMUST00000182556 Rsrc2-014 nonsense_mediated_decay Mus_musculus 0 1459
ENSMUST00000182584 Rsrc2-003 nonsense_mediated_decay Mus_musculus 0 841
ENSMUST00000182411 Rsrc2-016 nonsense_mediated_decay Mus_musculus 0 776
ENSMUST00000182015 Rsrc2-009 nonsense_mediated_decay Mus_musculus 0 691
ENSMUST00000183147 Rsrc2-008 nonsense_mediated_decay Mus_musculus 0 676
ENSMUST00000182985 Rsrc2-015 retained_intron Mus_musculus 0 654
ENSMUST00000111515 Rsrc2-202 protein_coding Mus_musculus 0 651
ENSMUST00000182968 Rsrc2-012 retained_intron Mus_musculus 0 651
ENSMUST00000182744 Rsrc2-011 retained_intron Mus_musculus 0 651
ENSMUST00000181980 Rsrc2-007 nonsense_mediated_decay Mus_musculus 0 645
ENSMUST00000182093 Rsrc2-018 nonsense_mediated_decay Mus_musculus 0 545
ENSMUST00000182241 Rsrc2-019 nonsense_mediated_decay Mus_musculus 0 521
ENSMUST00000119701 Gm12577-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000183253 Rsrc2-005 retained_intron Mus_musculus 0 322
ENSMUST00000182542 Rsrc2-021 retained_intron Mus_musculus 0 255
ENSMUST00000182612 Rsrc2-006 retained_intron Mus_musculus 0 255

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