C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00016H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000030304-ENSG00000198121 CGP 9606 9:110668771-111038458
GeneTranscriptPositionBiotype
ENSG00000030304 (MUSK)
muscle, skeletal, receptor tyrosine kinase 		ENST00000189978 (MUSK-201) 110668771-110800998 protein_coding
ENST00000374438 (MUSK-004) 110775347-110788101 protein_coding
ENST00000374439 (MUSK-003) 110687217-110706188 protein_coding
ENST00000374440 (MUSK-202) 110668859-110800998 protein_coding
ENST00000374448 (MUSK-001) 110668771-110800998 protein_coding
ENST00000416899 (MUSK-002) 110668779-110801579 protein_coding
ENSG00000198121 (LPAR1)
lysophosphatidic acid receptor 1 		ENST00000358883 (LPAR1-003) 110874177-111038085 protein_coding
ENST00000374430 (LPAR1-002) 110873778-110999466 protein_coding
ENST00000374431 (LPAR1-001) 110873263-111038043 protein_coding
ENST00000441240 (LPAR1-004) 110941668-111038458 protein_coding
ENST00000541779 (LPAR1-201) 110874321-111036207 protein_coding
ENSG00000206923 (RNU6-432P)
RNA, U6 small nuclear 432, pseudogene 		ENST00000384196 (RNU6-432P-201) 110903337-110903445 snRNA
CIL_00016H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000057280-ENSMUSG00000038668 CGP 10090 4:58285960-58553898
GeneTranscriptPositionBiotype
ENSMUSG00000038668 (Lpar1)
lysophosphatidic acid receptor 1 		ENSMUST00000055018 (Lpar1-001) 58435255-58553357 protein_coding
ENSMUST00000107570 (Lpar1-005) 58435255-58499403 protein_coding
ENSMUST00000107571 (Lpar1-002) 58435255-58553311 protein_coding
ENSMUST00000107574 (Lpar1-004) 58435255-58553628 protein_coding
ENSMUST00000107575 (Lpar1-003) 58435255-58553553 protein_coding
ENSMUST00000145361 (Lpar1-007) 58487134-58553184 protein_coding
ENSMUST00000147354 (Lpar1-006) 58487100-58553898 protein_coding
ENSMUST00000155170 (Lpar1-008) 58487045-58548401 protein_coding
ENSMUSG00000057280 (Musk)
muscle, skeletal, receptor tyrosine kinase 		ENSMUST00000081919 (Musk-201) 58285960-58374302 protein_coding
ENSMUST00000084578 (Musk-002) 58285962-58374303 protein_coding
ENSMUST00000098057 (Musk-202) 58285962-58374303 protein_coding
ENSMUST00000098059 (Musk-203) 58285962-58374302 protein_coding
ENSMUST00000102893 (Musk-001) 58285962-58374303 protein_coding
ENSMUST00000135879 (Musk-003) 58286175-58304324 processed_transcript
ENSMUST00000177951 (Musk-204) 58285962-58374302 protein_coding
ENSMUST00000179951 (Musk-205) 58285962-58374302 protein_coding
ENSMUSG00000083834 (Gm12577)
predicted gene 12577 		ENSMUST00000119701 (Gm12577-001) 58483252-58483825 processed_pseudogene
ENSMUSG00000093293 (Mir3095)
microRNA 3095 		ENSMUST00000175552 (Mir3095-201) 58441012-58441098 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00016H_0001ENSG00000030304ENST00000189978ENST00000374438ENST00000374439ENST00000374440ENST00000374448ENST00000416899ENSG00000198121ENST00000358883ENST00000374430ENST00000374431ENST00000441240ENST00000541779ENSG00000206923ENST00000384196CIL_00016H_0002ENSMUSG00000038668ENSMUST00000055018ENSMUST00000107570ENSMUST00000107571ENSMUST00000107574ENSMUST00000107575ENSMUST00000145361ENSMUST00000147354ENSMUST00000155170ENSMUSG00000057280ENSMUST00000081919ENSMUST00000084578ENSMUST00000098057ENSMUST00000098059ENSMUST00000102893ENSMUST00000135879ENSMUST00000177951ENSMUST00000179951ENSMUSG00000083834ENSMUST00000119701ENSMUSG00000093293ENSMUST00000175552
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00016H_0001ENSG00000030304ENST00000189978ENST00000374438ENST00000374439ENST00000374440ENST00000374448ENST00000416899ENSG00000198121ENST00000358883ENST00000374430ENST00000374431ENST00000441240ENST00000541779ENSG00000206923ENST00000384196CIL_00016H_0002ENSMUSG00000038668ENSMUST00000055018ENSMUST00000107570ENSMUST00000107574ENSMUST00000107575ENSMUST00000145361ENSMUSG00000057280ENSMUST00000081919ENSMUST00000084578ENSMUST00000098059ENSMUST00000102893ENSMUST00000135879ENSMUST00000177951ENSMUST00000179951ENSMUSG00000083834ENSMUST00000119701ENSMUSG00000093293ENSMUST00000175552
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000030304 ENST00000189978 N/A N/A N/A N/A 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000374438 N/A N/A N/A 0.179±0.00 N/A N/A N/A N/A N/A N/A N/A 0.019±0.00 0.090±0.00 N/A
ENST00000374439 N/A N/A N/A N/A N/A N/A N/A N/A 0.837±0.00 2.106±0.00 N/A 0.070±0.00 0.088±0.00 N/A
ENST00000374440 0.019±0.00 N/A 0.022±0.00 0.030±0.00 0.103±0.09 N/A 0.105±0.00 N/A 0.028±0.00 N/A N/A 0.043±0.03 0.116±0.06 N/A
ENST00000374448 N/A N/A N/A N/A N/A 0.271±0.00 N/A N/A N/A 0.373±0.00 0.131±0.00 N/A N/A N/A
ENST00000416899 N/A N/A N/A N/A 0.302±0.00 0.774±0.00 0.268±0.00 N/A 0.192±0.00 0.141±0.00 0.205±0.16 N/A 0.052±0.00 0.459±0.02
ENSG00000198121 ENST00000358883 N/A N/A 2.121±0.00 N/A 3.302±0.00 N/A 1.161±0.00 0.531±0.00 4.854±0.00 1.681±0.00 0.647±0.00 2.069±0.00 1.520±0.00 N/A
ENST00000374430 N/A N/A N/A 8.739±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000374431 3.697±0.00 15.311±0.00 N/A 7.903±4.23 0.904±0.00 12.812±10.24 1.987±0.00 2.883±2.76 1.426±0.00 4.381±0.00 2.231±0.00 1.903±1.70 6.438±0.77 6.598±3.68
ENST00000441240 N/A N/A N/A 12.566±0.00 3.991±0.00 8.234±0.00 1.962±0.00 N/A 13.988±0.00 7.348±0.00 2.265±0.00 4.162±0.00 N/A N/A
ENST00000541779 N/A N/A N/A N/A N/A N/A 0.877±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000206923 ENST00000384196 N/A 0.179±0.00 N/A N/A N/A N/A 0.167±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038668 ENSMUST00000055018 16.699±9.57 8.577±2.80 18.390±4.37 3.019±0.80 15.762±4.27 28.520±3.61 3.841±1.44 4.139±0.31 0.529±0.27 10.578±1.15 0.732±0.31 8.670±4.98 2.802±2.20 4.449±0.82
ENSMUST00000107570 N/A N/A N/A 3.727±0.00 7.358±0.00 N/A N/A N/A 0.143±0.03 N/A 0.590±0.50 1.743±0.42 3.143±0.70 4.196±1.54
ENSMUST00000107571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000107574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.457±0.00 N/A N/A
ENSMUST00000107575 N/A N/A 2.150±0.00 N/A N/A N/A N/A 0.779±0.00 0.136±0.04 N/A 0.844±0.10 2.188±0.35 N/A N/A
ENSMUST00000145361 N/A 14.620±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000057280 ENSMUST00000081919 0.009±0.00 0.020±0.02 N/A N/A N/A N/A 0.029±0.00 0.035±0.01 0.004±0.00 0.015±0.00 N/A 0.045±0.00 N/A 0.080±0.06
ENSMUST00000084578 0.017±0.00 0.048±0.04 N/A 0.008±0.00 0.017±0.00 0.512±0.03 0.052±0.02 0.141±0.03 0.017±0.03 0.092±0.08 N/A 0.311±0.17 N/A 0.048±0.01
ENSMUST00000098057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000098059 N/A N/A N/A N/A N/A N/A 0.015±0.00 0.022±0.00 N/A N/A N/A 0.064±0.03 0.356±0.26 N/A
ENSMUST00000102893 0.041±0.03 0.029±0.02 N/A 0.024±0.01 0.169±0.13 0.992±0.28 N/A 0.133±0.00 0.005±0.00 0.167±0.17 N/A 0.221±0.16 0.189±0.18 0.073±0.03
ENSMUST00000135879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A 0.076±0.00
ENSMUST00000177951 N/A N/A N/A N/A N/A 0.282±0.00 0.057±0.00 0.121±0.01 N/A N/A N/A 0.208±0.10 0.042±0.02 N/A
ENSMUST00000179951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.354±0.00 N/A N/A
ENSMUSG00000083834 ENSMUST00000119701 0.139±0.00 N/A 0.251±0.00 0.079±0.01 N/A N/A N/A N/A 0.076±0.08 N/A N/A 0.148±0.06 0.162±0.10 1.266±0.00
ENSMUSG00000093293 ENSMUST00000175552 N/A N/A N/A N/A N/A 8243.840±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

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