C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 7816
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119884 Gm7816-001 ENSMUSG00000083261 10090 + 5:39798214-39799407 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119884
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119884 0.556±0.17 0.292±0.09 0.607±0.37 2.305±1.67 0.281±0.21 0.302±0.36 0.125±0.06 0.374±0.12 0.986±0.77 0.246±0.04 0.047±0.02 0.504±0.43 0.377±0.42 0.575±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XJ CIL_0001XJ_0002 CGP 5:39613935-41708155

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330899 DNAJA1-001 protein_coding Homo_sapiens 0 1668
ENST00000399417 DNAJA1P3-001 processed_pseudogene Homo_sapiens 0 1428
ENST00000425106 DNAJA1P1-001 processed_pseudogene Homo_sapiens 0 863
ENST00000440278 DNAJA1P5-001 processed_pseudogene Homo_sapiens 0 725
ENST00000465677 DNAJA1-002 processed_transcript Homo_sapiens 0 418
ENST00000495015 DNAJA1-003 processed_transcript Homo_sapiens 0 375

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