C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, G
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119888 Ptprg-004 ENSMUSG00000021745 10090 + 14:12189943-12238563 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverOvaryPlacentaTestisENSMUST00000119888
Transcript ID Heart Liver Ovary Placenta Testis
ENSMUST00000119888 2.929±0.00 0.341±0.06 4.922±0.00 0.938±0.00 1.216±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QX CIL_0008QX_0002 VISTA 14:11475621-12079078
CIL_00034G CIL_00034G_0002 CGP 14:11553532-12303231

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:1901998 IMP toxin transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000092552 ptprga-201 protein_coding Danio_rerio 0 1434
ENSDART00000017309 ca16b-001 protein_coding Danio_rerio 0 869
ENSDART00000154392 ca16b-003 protein_coding Danio_rerio 0 279
ENST00000295874 PTPRG-002 protein_coding Homo_sapiens 0 2700
ENST00000468576 PTPRG-008 retained_intron Homo_sapiens 0 431
ENST00000474889 PTPRG-001 protein_coding Homo_sapiens 0 3310
ENST00000475012 PTPRG-005 processed_transcript Homo_sapiens 0 3018
ENST00000485215 PTPRG-007 processed_transcript Homo_sapiens 0 730
ENST00000615556 PTPRG-201 protein_coding Homo_sapiens 0 3310
ENST00000618938 PTPRG-202 protein_coding Homo_sapiens 0 3308

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